RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ZSWIM1Q9BR11 485 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 JPH2Q9BR39 696 aaPredicted RBP15.24■□□□□ 0.03
SCFD1-203ENST00000458591 TOPORSQ9NS56 1045 aaPredicted RBP15.24■□□□□ 0.03
SCFD1-203ENST00000458591 DNAJC17Q9NVM6 304 aaKnown RBP15.24■□□□□ 0.03
SCFD1-203ENST00000458591 PCDHA3Q9Y5H8 950 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 STK24Q9Y6E0 443 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 GOLGA6L10A0A0M3HER8 536 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 PHF2O75151 1096 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 DAB2IPQ5VWQ8 1189 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 LLGL2Q6P1M3 1020 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 CCDC127Q96BQ5 260 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 TEKT3Q9BXF9 490 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 TMEM117Q9H0C3 514 aa15.24■□□□□ 0.03
SCFD1-203ENST00000458591 PABPC3Q9H361 631 aaKnown RBP15.24■□□□□ 0.03
SCFD1-203ENST00000458591 SLC16A4O15374 487 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 RARAP10276 462 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 CREB1P16220 341 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 IFNAR2P48551 515 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 GPC5P78333 572 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 DRP2Q13474 957 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 SNX1Q13596 522 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 ANKRD20A8PQ5CZ79 823 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 ERMARDQ5T6L9 678 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 DENND2CQ68D51 928 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 B3GNT9Q6UX72 402 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 LDHDQ86WU2 507 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 CBWD2Q8IUF1 395 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 PPM1KQ8N3J5 372 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 C3orf20Q8ND61 904 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 NEK9Q8TD19 979 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 TRIM7Q9C029 511 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 CCDC113Q9H0I3 377 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 HSPBP1Q9NZL4 362 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 GGT7Q9UJ14 662 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 TRPC6Q9Y210 931 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 ZHX2Q9Y6X8 837 aa15.23■□□□□ 0.03
SCFD1-203ENST00000458591 YDJCA8MPS7 323 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 SOX10P56693 466 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 UGCGQ16739 394 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 MIER3Q7Z3K6 550 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 LRRC34Q8IZ02 419 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 CACNA2D3Q8IZS8 1091 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 EPS8L1Q8TE68 723 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 C1orf54Q8WWF1 131 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 PWWP2AQ96N64 755 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 PRMT1Q99873 361 aaKnown RBP15.22■□□□□ 0.03
SCFD1-203ENST00000458591 DDX23Q9BUQ8 820 aaKnown RBP15.22■□□□□ 0.03
SCFD1-203ENST00000458591 KCNH7Q9NS40 1196 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 KLC4Q9NSK0 619 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 SERPINA10Q9UK55 444 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 ODF2LQ9ULJ1 636 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 ATP8B3O60423 1300 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 C5orf60A6NFR6 353 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 NFIBO00712 420 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 RASSF9O75901 435 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 PAEPP09466 180 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 DLATP10515 647 aaKnown RBP15.22■□□□□ 0.03
SCFD1-203ENST00000458591 BCRP11274 1271 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 LRRC14Q15048 493 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 TRIP13Q15645 432 aaPredicted RBP15.22■□□□□ 0.03
SCFD1-203ENST00000458591 SLC27A3Q5K4L6 730 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 OTUD6AQ7L8S5 288 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 CCDC105Q8IYK2 499 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 NUP85Q9BW27 656 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 MLXIPLQ9NP71 852 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 HOMER2Q9NSB8 354 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 SEL1LQ9UBV2 794 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 NOCTQ9UK39 431 aaKnown RBP15.22■□□□□ 0.03
SCFD1-203ENST00000458591 TMX2Q9Y320 296 aa15.22■□□□□ 0.03
SCFD1-203ENST00000458591 FAM187AA6NFU0 413 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 CTNNA2P26232 953 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 PEX3P56589 373 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 PLA2G4FQ68DD2 849 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 RHOT2Q8IXI1 618 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 ATXN2LQ8WWM7 1075 aaKnown RBP15.21■□□□□ 0.03
SCFD1-203ENST00000458591 CHMP6Q96FZ7 201 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 FAM118BQ9BPY3 351 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 MXRA8Q9BRK3 442 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 HERPUD2Q9BSE4 406 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 FAM129AQ9BZQ8 928 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 RANBP17Q9H2T7 1088 aaKnown RBP15.21■□□□□ 0.03
SCFD1-203ENST00000458591 RGS16O15492 202 aaPredicted RBP15.21■□□□□ 0.03
SCFD1-203ENST00000458591 CLDN3O15551 220 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 DHX15O43143 795 aaKnown RBP15.21■□□□□ 0.03
SCFD1-203ENST00000458591 CCDC172P0C7W6 258 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 PDE6BP35913 854 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 SCTRP47872 440 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 FMO1Q01740 532 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 DHX34Q14147 1143 aaKnown RBP15.21■□□□□ 0.03
SCFD1-203ENST00000458591 SIX1Q15475 284 aaPredicted RBP15.21■□□□□ 0.03
SCFD1-203ENST00000458591 STXBP4Q6ZWJ1 553 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 SLC9A9Q8IVB4 645 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 UBL4BQ8N7F7 174 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 MGARPQ8TDB4 240 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 ATG4AQ8WYN0 398 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 ZNF317Q96PQ6 595 aaPredicted RBP15.21■□□□□ 0.03
SCFD1-203ENST00000458591 ACTR5Q9H9F9 607 aaPredicted RBP15.21■□□□□ 0.03
SCFD1-203ENST00000458591 USP20Q9Y2K6 914 aa15.21■□□□□ 0.03
SCFD1-203ENST00000458591 DIS3Q9Y2L1 958 aaKnown RBP15.21■□□□□ 0.03
SCFD1-203ENST00000458591 SPOPO43791 374 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms