RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 NAMPTP43490 491 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 STRN3Q13033 797 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 MXD4Q14582 209 aaPredicted RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 TARBP2Q15633 366 aaKnown RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 DGKDQ16760 1214 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 HSDL1Q3SXM5 330 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 TRIM60Q495X7 471 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 ZNF484Q5JVG2 852 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 TRMT1LQ7Z2T5 733 aaKnown RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 USP37Q86T82 979 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 ARRDC4Q8NCT1 418 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 ZNF397Q8NF99 534 aaPredicted RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 OR6J1Q8NGC5 347 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 DEPTORQ8TB45 409 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 TMEM174Q8WUU8 243 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 ATXN2LQ8WWM7 1075 aaKnown RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 KCNN1Q92952 543 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 PCMTD1Q96MG8 357 aaPredicted RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 ERGIC2Q96RQ1 377 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 FIZ1Q96SL8 496 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 NTPCRQ9BSD7 190 aaKnown RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 STRA6Q9BX79 667 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 NAA15Q9BXJ9 866 aaKnown RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 FGFBP2Q9BYJ0 223 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 KATNBL1Q9H079 304 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 NDST4Q9H3R1 872 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 ATP11BQ9Y2G3 1177 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 Q9Y3F1 56 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 TMEM150BA6NC51 233 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 KIAA0355O15063 1070 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 MAPK13O15264 365 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 SLC16A4O15374 487 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 MAGEB2O15479 319 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 MAFO75444 373 aaPredicted RBP9.77□□□□□ -0.85
VPS50-207ENST00000458530 LGALS2P05162 132 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 KRT13P13646 458 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 ADCYAP1R1P41586 468 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 NPTX2P47972 431 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 KCNJ6P48051 423 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 EFNA5P52803 228 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 TNFAIP2Q03169 654 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 TBX2Q13207 712 aaPredicted RBP9.77□□□□□ -0.85
VPS50-207ENST00000458530 TFDP1Q14186 410 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 PLCB4Q15147 1175 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 CCDC144BQ3MJ40 725 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 FIGNQ5HY92 759 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 GJC2Q5T442 439 aaPredicted RBP9.77□□□□□ -0.85
VPS50-207ENST00000458530 IER5Q5VY09 327 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 CEP135Q66GS9 1140 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 ARMCX5Q6P1M9 558 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 MAP4K3Q8IVH8 894 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 TRIM59Q8IWR1 403 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 ZBTB8OSQ8IWT0 167 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 FAM186BQ8IYM0 893 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 PSPC1Q8WXF1 523 aaKnown RBP9.77□□□□□ -0.85
VPS50-207ENST00000458530 PANX2Q96RD6 677 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 PCYT2Q99447 389 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 AP5M1Q9H0R1 490 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 C2orf40Q9H1Z8 148 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 BCAS3Q9H6U6 928 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 XPNPEP1Q9NQW7 623 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 PDGFCQ9NRA1 345 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 AGPAT3Q9NRZ7 376 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 DAAM1Q9Y4D1 1078 aa9.77□□□□□ -0.85
VPS50-207ENST00000458530 DENND3A2RUS2 1198 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 LRRIQ4A6NIV6 560 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 ASAP2O43150 1006 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 SEPT4O43236 478 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 TEX33O43247 280 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 ZNF500O60304 480 aaPredicted RBP9.76□□□□□ -0.85
VPS50-207ENST00000458530 STX10O60499 249 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 EXOC3O60645 756 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 N4BP1O75113 896 aaKnown RBP9.76□□□□□ -0.85
VPS50-207ENST00000458530 MMP3P08254 477 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 SKILP12757 684 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 HOXD8P13378 290 aaPredicted RBP9.76□□□□□ -0.85
VPS50-207ENST00000458530 TRIM21P19474 475 aaKnown RBP9.76□□□□□ -0.85
VPS50-207ENST00000458530 ATP4AP20648 1035 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 DNAJB2P25686 324 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 TMOD1P28289 359 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 CPT1AP50416 773 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 ZC2HC1CQ53FD0 456 aaPredicted RBP9.76□□□□□ -0.85
VPS50-207ENST00000458530 MIIPQ5JXC2 388 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 RASIP1Q5U651 963 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 TMEM161BQ8NDZ6 487 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 CACTINQ8WUQ7 758 aaKnown RBP9.76□□□□□ -0.85
VPS50-207ENST00000458530 AFG1LQ8WV93 481 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 COPS5Q92905 334 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 BICD1Q96G01 975 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 ASB2Q96Q27 587 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 SH2D3AQ9BRG2 576 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 KATNAL1Q9BW62 490 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 EDEM3Q9BZQ6 932 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 NUCKS1Q9H1E3 243 aaKnown RBP9.76□□□□□ -0.85
VPS50-207ENST00000458530 TMEM134Q9H6X4 195 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 GPRC5CQ9NQ84 441 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 ZNHIT6Q9NWK9 470 aaKnown RBP9.76□□□□□ -0.85
VPS50-207ENST00000458530 ARHGAP28Q9P2N2 729 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 TBX20Q9UMR3 447 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms