RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 NXF3Q9H4D5 531 aaKnown RBP17.87■□□□□ 0.45
GPC1-206ENST00000455111 ANKEF1Q9NU02 776 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 CACNG4Q9UBN1 327 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 MTCL1Q9Y4B5 1905 aaKnown RBP17.87■□□□□ 0.45
GPC1-206ENST00000455111 ARL5CA6NH57 179 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 GAS2O43903 313 aaKnown RBP17.86■□□□□ 0.45
GPC1-206ENST00000455111 NEMFO60524 1076 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 SRGAP2BP0DMP2 458 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 MLH1P40692 756 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 SCNN1GP51170 649 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 CLCN4P51793 760 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 RNASELQ05823 741 aaKnown RBP17.86■□□□□ 0.45
GPC1-206ENST00000455111 ITIH3Q06033 890 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 KIAA1841Q6NSI8 718 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 RSPH1Q8WYR4 309 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 BSNDQ8WZ55 320 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 TMEM175Q9BSA9 504 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 CSRNP2Q9H175 543 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 KCNH6Q9H252 994 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 CNTNAP2Q9UHC6 1331 aa17.86■□□□□ 0.45
GPC1-206ENST00000455111 VWA8A3KMH1 1905 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 MARCH6O60337 910 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 DGAT1O75907 488 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 BAG4O95429 457 aaKnown RBP17.85■□□□□ 0.45
GPC1-206ENST00000455111 ASGR2P07307 311 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 POU5F1BQ06416 359 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 ECM1Q16610 540 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 TPRNQ4KMQ1 711 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 POTEGQ6S5H5 508 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 TMC5Q6UXY8 1006 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 CATSPER3Q86XQ3 398 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 EXOC8Q8IYI6 725 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 FBXL6Q8N531 539 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 KREMEN2Q8NCW0 462 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 POLR3FQ9H1D9 316 aaPredicted RBP17.85■□□□□ 0.45
GPC1-206ENST00000455111 TSHZ2Q9NRE2 1034 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 USP20Q9Y2K6 914 aa17.85■□□□□ 0.45
GPC1-206ENST00000455111 PRG3Q9Y2Y8 225 aaPredicted RBP17.85■□□□□ 0.45
GPC1-206ENST00000455111 INO80B-WBP1J3KQ70 363 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 ITGA4P13612 1032 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 AKAP5P24588 427 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 MRE11P49959 708 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 KIAA0319Q5VV43 1072 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 URGCPQ8TCY9 931 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 RABGGTAQ92696 567 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 B3GALT6Q96L58 329 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 HERC2P3Q9BVR0 1158 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 NFKBIZQ9BYH8 718 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 FAN1Q9Y2M0 1017 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 MYO15AQ9UKN7 3530 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 TRIP11Q15643 1979 aa17.84■□□□□ 0.45
GPC1-206ENST00000455111 USO1O60763 962 aaKnown RBP17.83■□□□□ 0.44
GPC1-206ENST00000455111 N4BP1O75113 896 aaKnown RBP17.83■□□□□ 0.44
GPC1-206ENST00000455111 SOD2P04179 222 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 ALDH2P05091 517 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 ATP2B1P20020 1258 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 AXLP30530 894 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 MCM7P33993 719 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 MXD4Q14582 209 aaPredicted RBP17.83■□□□□ 0.44
GPC1-206ENST00000455111 NBR1Q14596 966 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 NOTUMQ6P988 496 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 MAEAQ7L5Y9 396 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 GPR149Q86SP6 731 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 CCDC83Q8IWF9 413 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 C4orf32Q8N8J7 132 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 NECTIN4Q96NY8 510 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 PAAF1Q9BRP4 392 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 APOL6Q9BWW8 343 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 POLD4Q9HCU8 107 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 DZANK1Q9NVP4 752 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 DMDP11532 3685 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 DOCK8Q8NF50 2099 aa17.83■□□□□ 0.44
GPC1-206ENST00000455111 DOCK6Q96HP0 2047 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 A0A1B0GUA9 196 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 C2CD2LO14523 706 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 TEX28O15482 410 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 ERLIN2O94905 339 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 NPTXRO95502 500 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 MYBP10242 640 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 IGFBP6P24592 240 aaPredicted RBP17.82■□□□□ 0.44
GPC1-206ENST00000455111 MTHFRP42898 656 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 OR1G1P47890 313 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 GIT2Q14161 759 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 CDCA2Q69YH5 1023 aaPredicted RBP17.82■□□□□ 0.44
GPC1-206ENST00000455111 CES5AQ6NT32 575 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 CNNM3Q8NE01 707 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 RIPOR3Q96MK2 946 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 RPS6KC1Q96S38 1066 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 GPR62Q9BZJ7 368 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 BRMS1Q9HCU9 246 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 CHST7Q9NS84 486 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 KLK14Q9P0G3 267 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 KANSL3Q9P2N6 904 aa17.82■□□□□ 0.44
GPC1-206ENST00000455111 NEFLP07196 543 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 AVPR2P30518 371 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 ZNF174Q15697 407 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 NAB2Q15742 525 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 ZDHHC14Q8IZN3 488 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 CCDC51Q96ER9 411 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms