RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 FZD8Q9H461 694 aa7.43□□□□□ -1.22
ECHDC1-210ENST00000454859 FAM207AQ9NSI2 230 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-210ENST00000454859 GCNT4Q9P109 453 aa7.43□□□□□ -1.22
ECHDC1-210ENST00000454859 TSKSQ9UJT2 592 aa7.43□□□□□ -1.22
ECHDC1-210ENST00000454859 GNEQ9Y223 722 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-210ENST00000454859 RALGAPA2Q2PPJ7 1873 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 A0A0A6YYK5 440 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 TULP1O00294 542 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 DYNC1I1O14576 645 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 ZEB2O60315 1214 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 C22orf31O95567 290 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 MMP3P08254 477 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 PRLRP16471 622 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 AXLP30530 894 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 CASP4P49662 377 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 CYP2J2P51589 502 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 BPIFB4P59827 614 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 GCNT1Q02742 428 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 MCL1Q07820 350 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 KCNA1Q09470 495 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 LAMTOR4Q0VGL1 99 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 KIF5AQ12840 1032 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 TCEAL1Q15170 157 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 SLC18A3Q16572 532 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 DCAF17Q5H9S7 520 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 TCERG1LQ5VWI1 586 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 MFSD14CQ5VZR4 134 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 RRAGAQ7L523 313 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 TTC39CQ8N584 583 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 OR6J1Q8NGC5 347 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 PRPF31Q8WWY3 499 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 BSNDQ8WZ55 320 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 BICD1Q96G01 975 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 MAP7D2Q96T17 732 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 C16orf70Q9BSU1 422 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 AP5M1Q9H0R1 490 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 GPBP1L1Q9HC44 474 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 AGPAT5Q9NUQ2 364 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 SUCLA2Q9P2R7 463 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 GJD2Q9UKL4 321 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 AGO2Q9UKV8 859 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 TRPC6Q9Y210 931 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 TNFSF13BQ9Y275 285 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 THSD7BQ9C0I4 1608 aa7.42□□□□□ -1.22
ECHDC1-210ENST00000454859 SMIM35A0A1B0GVV1 85 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 SOWAHDA6NJG2 315 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 LRRC53A6NM62 1247 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 H3BRB1 525 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 OGTO15294 1046 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 DUSP11O75319 330 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 F2P00734 622 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 TUBBP07437 444 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 PROZP22891 400 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 HOXD10P28358 340 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 ADSSP30520 456 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 CASQ1P31415 396 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 SOX5P35711 763 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 MXI1P50539 228 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 MFAP3P55082 362 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 POLR2FP61218 127 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 NCBP1Q09161 790 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 CAPSQ13938 189 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 KIF22Q14807 665 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 C15orf39Q6ZRI6 1047 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 ZNF677Q86XU0 584 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 FBXL13Q8NEE6 735 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 TRIM58Q8NG06 486 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 LMO3Q8TAP4 145 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 ASAP3Q8TDY4 903 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 ZNF526Q8TF50 670 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 RPGRIP1Q96KN7 1286 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 C16orf45Q96MC5 204 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 INTS2Q9H0H0 1204 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 UPF3AQ9H1J1 476 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 DEF6Q9H4E7 631 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 TUT1Q9H6E5 874 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 SIX2Q9NPC8 291 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 GPRC5CQ9NQ84 441 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 DNAI1Q9UI46 699 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 EVPLQ92817 2033 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 MBLAC1A4D2B0 266 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 LRRIQ4A6NIV6 560 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 HAS3O00219 553 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 CLDN3O15551 220 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 AKR1B10O60218 316 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 MSCO60682 206 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 ZNF865P0CJ78 1059 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 MCF2P10911 925 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 AKR1A1P14550 325 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 TBXAS1P24557 533 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 MAP2K2P36507 400 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 KIF11P52732 1056 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 KLHL30Q0D2K2 578 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 HGSNATQ68CP4 663 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 EFCAB12Q6NXP0 572 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 MPZL3Q6UWV2 235 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 TOGARAM2Q6ZUX3 1019 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 TAS1R3Q7RTX0 852 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 IRF2BP2Q7Z5L9 587 aa7.41□□□□□ -1.22
ECHDC1-210ENST00000454859 KIAA1328Q86T90 577 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms