RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 RRAGBQ5VZM2 374 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 MIER3Q7Z3K6 550 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 ZNF410Q86VK4 478 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 TMEM192Q8IY95 271 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 C17orf53Q8N3J3 647 aaPredicted RBP5.47□□□□□ -1.53
RIF1-207ENST00000454583 FAXDC2Q96IV6 333 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 SPATA33Q96N06 139 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 ZNF830Q96NB3 372 aaPredicted RBP5.47□□□□□ -1.53
RIF1-207ENST00000454583 PPP1R10Q96QC0 940 aaKnown RBP5.47□□□□□ -1.53
RIF1-207ENST00000454583 SIX4Q9UIU6 781 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 TNFSF13BQ9Y275 285 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 MIA3Q5JRA6 1907 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 A0A1W2PQJ5 194 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 TRIM43BA6NCK2 446 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 H3BRB1 525 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 GYPCP04921 128 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 ASGR1P07306 291 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 GARTP22102 1010 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 CCT6AP40227 531 aaKnown RBP5.47□□□□□ -1.53
RIF1-207ENST00000454583 BEX3Q00994 111 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 LPIN1Q14693 890 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 COL19A1Q14993 1142 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 PKN2Q16513 984 aaKnown RBP5.47□□□□□ -1.53
RIF1-207ENST00000454583 KNOP1Q1ED39 458 aaKnown RBP5.47□□□□□ -1.53
RIF1-207ENST00000454583 PLEKHG4Q58EX7 1191 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 SEPT14Q6ZU15 432 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 KSR1Q8IVT5 923 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 NME8Q8N427 588 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 STAMQ92783 540 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 P2RX5Q93086 422 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 TRIM43Q96BQ3 446 aaPredicted RBP5.47□□□□□ -1.53
RIF1-207ENST00000454583 CEP63Q96MT8 703 aa5.47□□□□□ -1.53
RIF1-207ENST00000454583 TUT1Q9H6E5 874 aaKnown RBP5.47□□□□□ -1.53
RIF1-207ENST00000454583 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.46□□□□□ -1.53
RIF1-207ENST00000454583 A0A1W2PQC6 194 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 TTC26A0AVF1 554 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 SGPL1O95470 568 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 CASP4P49662 377 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 CDK17Q00537 523 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 FANCCQ00597 558 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 MYL5Q02045 173 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 DGKDQ16760 1214 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 PKDCCQ504Y2 493 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 IER5Q5VY09 327 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 SLC39A5Q6ZMH5 540 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 WHAMMQ8TF30 809 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 DIS3LQ8TF46 1054 aaKnown RBP5.46□□□□□ -1.53
RIF1-207ENST00000454583 KIFAP3Q92845 792 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 ZMAT2Q96NC0 199 aaKnown RBP5.46□□□□□ -1.53
RIF1-207ENST00000454583 ZSWIM1Q9BR11 485 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 SDF4Q9BRK5 362 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 VN1R3Q9BXE9 311 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 BCO2Q9BYV7 579 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 TYW1Q9NV66 732 aaKnown RBP5.46□□□□□ -1.53
RIF1-207ENST00000454583 PANK4Q9NVE7 773 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 FANCLQ9NW38 375 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 HDAC6Q9UBN7 1215 aa5.46□□□□□ -1.53
RIF1-207ENST00000454583 WDFY3Q8IZQ1 3526 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 PLXND1Q9Y4D7 1925 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 LRRIQ3A6PVS8 624 aaPredicted RBP5.46□□□□□ -1.54
RIF1-207ENST00000454583 PTGESO14684 152 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 MYCLP12524 364 aaPredicted RBP5.46□□□□□ -1.54
RIF1-207ENST00000454583 CCL5P13501 91 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 DARSP14868 501 aaKnown RBP5.46□□□□□ -1.54
RIF1-207ENST00000454583 KCNE1P15382 129 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 GRK4P32298 578 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 STAT6P42226 847 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 CPT1AP50416 773 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 GSCP56915 257 aaPredicted RBP5.46□□□□□ -1.54
RIF1-207ENST00000454583 FOXK1P85037 733 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 CYP4A11Q02928 519 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 DSC1Q08554 894 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 FBXO47Q5MNV8 452 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 GPBP1Q86WP2 473 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 EFCAB13Q8IY85 973 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 HELQQ8TDG4 1101 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 FAM167AQ96KS9 214 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 PRIMPOLQ96LW4 560 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 PANX2Q96RD6 677 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 NOC4LQ9BVI4 516 aaKnown RBP5.46□□□□□ -1.54
RIF1-207ENST00000454583 AGO3Q9H9G7 860 aaKnown RBP5.46□□□□□ -1.54
RIF1-207ENST00000454583 MYO15AQ9UKN7 3530 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 COL6A3P12111 3177 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 B4GALT5O43286 388 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 PLXNA2O75051 1894 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 ZNF623O75123 536 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 AMPD2Q01433 879 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 ALCAMQ13740 583 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 TTLL12Q14166 644 aaPredicted RBP5.46□□□□□ -1.54
RIF1-207ENST00000454583 LRRC26Q2I0M4 334 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 NBPF20Q3BBV1 942 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 CBWD6Q4V339 395 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 BRDTQ58F21 947 aaPredicted RBP5.46□□□□□ -1.54
RIF1-207ENST00000454583 CBWD3Q5JTY5 395 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 CBWD5Q5RIA9 395 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 SV2BQ7L1I2 683 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 FRMD5Q7Z6J6 570 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 PRPF31Q8WWY3 499 aaKnown RBP5.46□□□□□ -1.54
RIF1-207ENST00000454583 SEMA4DQ92854 862 aa5.46□□□□□ -1.54
RIF1-207ENST00000454583 PPP1R13BQ96KQ4 1090 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms