RNA–Protein interactions for RNA: ENST00000453944.1

DDX59-208, Transcript of DEAD-box helicase 59, human

TSL 3

Gene DDX59, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX59-208	ENST00000453944	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.91	□□□□□ -1.62
DDX59-208	ENST00000453944	CFAP20	Q9Y6A4	193 aa	Known RBP	4.91	□□□□□ -1.62
DDX59-208	ENST00000453944	RPTOR	Q8N122	1335 aa		4.91	□□□□□ -1.62
DDX59-208	ENST00000453944		A0A088AWK7	358 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944		A0A0G2JNJ9	132 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	ZNF503-AS2	A6NEH8	195 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944		H3BUI4	141 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	WNT10B	O00744	389 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	KPNA5	O15131	536 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	PRAMEF4	O60810	478 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	FOS	P01100	380 aa	Predicted RBP	4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	GAA	P10253	952 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	PRIM2	P49643	509 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	KCNQ1	P51787	676 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	HK3	P52790	923 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	EPHB3	P54753	998 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	GP2	P55259	537 aa	Known RBP	4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	FOXO4	P98177	505 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	NOG	Q13253	232 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	ACAP1	Q15027	740 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	CXXC5	Q7LFL8	322 aa	Known RBP	4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	ZSWIM9	Q86XI8	627 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	IGDCC3	Q8IVU1	814 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	FBXO18	Q8NFZ0	1043 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	NSUN6	Q8TEA1	469 aa	Known RBP	4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	NKD2	Q969F2	451 aa	Predicted RBP	4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	CDK5RAP3	Q96JB5	506 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	WDR92	Q96MX6	357 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	CLIC6	Q96NY7	704 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	DIRC2	Q96SL1	478 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	C22orf23	Q9BZE7	217 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944		Q9UFV3	132 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	MBD1	Q9UIS9	605 aa	Predicted RBP	4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	CORO2B	Q9UQ03	480 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944	USP19	O94966	1318 aa		4.9	□□□□□ -1.63
DDX59-208	ENST00000453944		H0Y858	1186 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	KNG1	P01042	644 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	LTA4H	P09960	611 aa	Known RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	SETSIP	P0DME0	302 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	COL6A1	P12109	1028 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	MYF5	P13349	255 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	LIMS1	P48059	325 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	TM4SF4	P48230	202 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	CACNB3	P54284	484 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	RAB1A	P62820	205 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	NKX6-1	P78426	367 aa	Predicted RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	MAP3K12	Q12852	859 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	STK3	Q13188	491 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	SNAPC2	Q13487	334 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	PLS1	Q14651	629 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	TARBP2	Q15633	366 aa	Known RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	INO80D	Q53TQ3	878 aa	Predicted RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	ZMYM1	Q5SVZ6	1142 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	TMEM200B	Q69YZ2	307 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	MPZL3	Q6UWV2	235 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	CBLL1	Q75N03	491 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	HEATR3	Q7Z4Q2	680 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	IFNL2	Q8IZJ0	200 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	ZGPAT	Q8N5A5	531 aa	Known RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	CELF5	Q8N6W0	485 aa	Known RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	ENAH	Q8N8S7	591 aa	Predicted RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	KY	Q8NBH2	561 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	C3orf20	Q8ND61	904 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	REPS2	Q8NFH8	660 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	MZB1	Q8WU39	189 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	SNX33	Q8WV41	574 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	ZBTB8A	Q96BR9	441 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	PGBD4	Q96DM1	585 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	MRGPRX4	Q96LA9	322 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	SGCZ	Q96LD1	299 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	RIPOR3	Q96MK2	946 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	PDCD2L	Q9BRP1	358 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	OSBPL6	Q9BZF3	934 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	MCOLN1	Q9GZU1	580 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	TLR9	Q9NR96	1032 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	TDP1	Q9NUW8	608 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	CPA4	Q9UI42	421 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	TPCN1	Q9ULQ1	816 aa		4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	OAS3	Q9Y6K5	1087 aa	Known RBP	4.89	□□□□□ -1.63
DDX59-208	ENST00000453944	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	CCDC189	A1A4V9	331 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	RHPN2P1	A8MT19	583 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	FAM171A2	A8MVW0	826 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944		F5H423	210 aa	Predicted RBP	4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	HRK	O00198	91 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	ADCY6	O43306	1168 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	NCK2	O43639	380 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	MAF	O75444	373 aa	Predicted RBP	4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	TCEA3	O75764	348 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	FSBP	O95073	299 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	AMY1A	P04745	511 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	KIT	P10721	976 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	PAX3	P23760	479 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	IGFBP6	P24592	240 aa	Predicted RBP	4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	IL13	P35225	146 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	PER3	P56645	1201 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	GPSM2	P81274	684 aa		4.88	□□□□□ -1.63
DDX59-208	ENST00000453944	IFIT5	Q13325	482 aa	Known RBP	4.88	□□□□□ -1.63

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