RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 PCBP4P57723 403 aaKnown RBP6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 SRSF5Q13243 272 aaKnown RBP6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 PTPN14Q15678 1187 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 ELOA3BQ3SY89 546 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 PLPP4Q5VZY2 271 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 KIAA1211LQ6NV74 962 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 RUFY4Q6ZNE9 571 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 GPR149Q86SP6 731 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 TTC6Q86TZ1 520 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 NPAS4Q8IUM7 802 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 CCDC146Q8IYE0 955 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 LRRC47Q8N1G4 583 aaKnown RBP6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 C7orf31Q8N865 590 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 ELOA3Q8NG57 546 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 LINC01599Q8WXQ3 324 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 SHDQ96IW2 340 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 FRMD6Q96NE9 622 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 KLHL5Q96PQ7 755 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 NUP88Q99567 741 aaPredicted RBP6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 RBSNQ9H1K0 784 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 BCAS3Q9H6U6 928 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 CYP39A1Q9NYL5 469 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 MYH1P12882 1939 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 A0A087WV48 116 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 C2orf71A6NGG8 1288 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 MPHOSPH10O00566 681 aaKnown RBP6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 EIF1AYO14602 144 aaKnown RBP6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 AKR1B1P15121 316 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 ICA1Q05084 483 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 ENOX2Q16206 610 aaKnown RBP6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 LETM2Q2VYF4 491 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 NAA16Q6N069 864 aaPredicted RBP6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 C1orf127Q8N9H9 656 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 SLC22A17Q8WUG5 538 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 ARRDC1-AS1Q9H2J1 176 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 SH2D4AQ9H788 454 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 ACAD9Q9H845 621 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 LTB4R2Q9NPC1 389 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 ENAMQ9NRM1 1142 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 TMEM260Q9NX78 707 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 LCTP09848 1927 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 SPG11Q96JI7 2443 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 SPTBN1Q01082 2364 aaKnown RBP6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 NAV1Q8NEY1 1877 aa6.3□□□□□ -1.4
SBDSP1-204ENST00000453858 RAD50Q92878 1312 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 A6NHS1 94 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 C4orf47A7E2U8 309 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 ZBED4O75132 1171 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 CAND2O75155 1236 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 KIF4AO95239 1232 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 F2P00734 622 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 CHRNA1P02708 482 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 EPXP11678 715 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 CD72P21854 359 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 RAP1GAPP47736 663 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 GATMP50440 423 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 GPC5P78333 572 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 ATP8B2P98198 1209 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 PRKCQQ04759 706 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 ARHGAP1Q07960 439 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 SNW1Q13573 536 aaKnown RBP6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 WTAPQ15007 396 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 RNF43Q68DV7 783 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 TMC5Q6UXY8 1006 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 CCDC149Q6ZUS6 474 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 GALNT12Q8IXK2 581 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 CACTIN-AS1Q8N1I8 211 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 SVOPQ8N4V2 548 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 C12orf50Q8NA57 414 aaPredicted RBP6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 RGS22Q8NE09 1264 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 MRPS27Q92552 414 aaKnown RBP6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 TTC9Q92623 222 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 ACDQ96AP0 544 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 MDFIQ99750 246 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 TCF25Q9BQ70 676 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 NOL10Q9BSC4 688 aaKnown RBP6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 RPP25Q9BUL9 199 aaKnown RBP6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 HOMER2Q9NSB8 354 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 DNAJB12Q9NXW2 375 aaKnown RBP6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 FRRS1LQ9P0K9 344 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 CNTN3Q9P232 1028 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 LRP2BPQ9P2M1 347 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 KLF15Q9UIH9 416 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 SALL4Q9UJQ4 1053 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 PCDHB12Q9Y5F1 795 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 SPAG17Q6Q759 2223 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 MYH7BA7E2Y1 1941 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 PLXNB3Q9ULL4 1909 aa6.29□□□□□ -1.4
SBDSP1-204ENST00000453858 LOC102724159A0A0B4J2E5 919 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 OIP5O43482 229 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 GHRHP01286 108 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 GP1BBP13224 206 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 EPCAMP16422 314 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 EDNRBP24530 442 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 CNR2P34972 360 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 ADH7P40394 386 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 MAPK8P45983 427 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 CFHR1Q03591 330 aa6.28□□□□□ -1.4
SBDSP1-204ENST00000453858 UBXN2BQ14CS0 331 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms