RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 KLRC1P26715 233 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 AARSP49588 968 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNX17-204ENST00000453453 TFDP1Q14186 410 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 SLC9C1Q4G0N8 1177 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 ZC2HC1CQ53FD0 456 aaPredicted RBP17.28■□□□□ 0.36
SNX17-204ENST00000453453 ANKRD40Q6AI12 368 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 MTHFD1LQ6UB35 978 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 HS2ST1Q7LGA3 356 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 CTAGE6Q86UF2 777 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 CTAGE4Q8IX94 777 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 LRRC71Q8N4P6 559 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 DEPTORQ8TB45 409 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 ASAP3Q8TDY4 903 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 MED15Q96RN5 788 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 THAP9Q9H5L6 903 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 TYW1Q9NV66 732 aaKnown RBP17.28■□□□□ 0.36
SNX17-204ENST00000453453 SUCLA2Q9P2R7 463 aaPredicted RBP17.28■□□□□ 0.36
SNX17-204ENST00000453453 MAGEC2Q9UBF1 373 aaPredicted RBP17.28■□□□□ 0.36
SNX17-204ENST00000453453 PPP1R37O75864 691 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 PMS1P54277 932 aaKnown RBP17.27■□□□□ 0.36
SNX17-204ENST00000453453 GTF2BQ00403 316 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 EDRF1Q3B7T1 1238 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 MAP9Q49MG5 647 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 RAD9BQ6WBX8 426 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 C7orf31Q8N865 590 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 KLHDC9Q8NEP7 349 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 PRPF31Q8WWY3 499 aaKnown RBP17.27■□□□□ 0.36
SNX17-204ENST00000453453 BSNDQ8WZ55 320 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 RPGRIP1Q96KN7 1286 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 FAM107BQ9H098 131 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 EPC1Q9H2F5 836 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 KCTD10Q9H3F6 313 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 PDE11AQ9HCR9 933 aa17.27■□□□□ 0.36
SNX17-204ENST00000453453 DENND3A2RUS2 1198 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 MAGEA9P43362 315 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 CLCN3P51790 818 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 SH3TC2Q8TF17 1288 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 LMBR1Q8WVP7 490 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 DUSP9Q99956 384 aaKnown RBP17.26■□□□□ 0.35
SNX17-204ENST00000453453 STRA6Q9BX79 667 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNX17-204ENST00000453453 SAMSN1Q9NSI8 373 aaKnown RBP17.26■□□□□ 0.35
SNX17-204ENST00000453453 SETD4Q9NVD3 440 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 VPS18Q9P253 973 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 SCN10AQ9Y5Y9 1956 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 SIP14410 1827 aa17.26■□□□□ 0.35
SNX17-204ENST00000453453 C17orf102A2RUQ5 167 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 CABYRO75952 493 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 RPL13P26373 211 aaKnown RBP17.25■□□□□ 0.35
SNX17-204ENST00000453453 FKBP3Q00688 224 aaKnown RBP17.25■□□□□ 0.35
SNX17-204ENST00000453453 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 STRN3Q13033 797 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 KCNA10Q16322 511 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 ZCWPW2Q504Y3 356 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 NFRKBQ6P4R8 1299 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 CXCL17Q6UXB2 119 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 ZNF662Q6ZS27 426 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 CTU1Q7Z7A3 348 aaKnown RBP17.25■□□□□ 0.35
SNX17-204ENST00000453453 RHPN2Q8IUC4 686 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 ZBTB8OSQ8IWT0 167 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 ARRDC4Q8NCT1 418 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 DESI2Q9BSY9 194 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 C2orf40Q9H1Z8 148 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 YY1AP1Q9H869 796 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 TBX20Q9UMR3 447 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 TRAF3IP3Q9Y228 551 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 AKT3Q9Y243 479 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 SOWAHDA6NJG2 315 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 ASGR1P07306 291 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 HSPA8P11142 646 aaKnown RBP17.25■□□□□ 0.35
SNX17-204ENST00000453453 TNNT3P45378 269 aaPredicted RBP17.25■□□□□ 0.35
SNX17-204ENST00000453453 EFNA5P52803 228 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 SNRPFP62306 86 aaKnown RBP17.25■□□□□ 0.35
SNX17-204ENST00000453453 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
SNX17-204ENST00000453453 DRP2Q13474 957 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 CAPSQ13938 189 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 HSP90AA4PQ58FG1 418 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 ZNF569Q5MCW4 686 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 CYP26C1Q6V0L0 522 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 RUBCNQ92622 972 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 CEP63Q96MT8 703 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 KIFC3Q9BVG8 833 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 ARHGAP28Q9P2N2 729 aa17.25■□□□□ 0.35
SNX17-204ENST00000453453 LIMA1Q9UHB6 759 aaKnown RBP17.25■□□□□ 0.35
SNX17-204ENST00000453453 ZMYM2Q9UBW7 1377 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 TARSL2A2RTX5 802 aaKnown RBP17.24■□□□□ 0.35
SNX17-204ENST00000453453 CETN3O15182 167 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 EEF1GP26641 437 aaKnown RBP17.24■□□□□ 0.35
SNX17-204ENST00000453453 HOXD13P35453 343 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 CTCFP49711 727 aaPredicted RBP17.24■□□□□ 0.35
SNX17-204ENST00000453453 CDC42EP1Q00587 391 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 RBL2Q08999 1139 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 CASP8Q14790 479 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 MARCH8Q5T0T0 291 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 MAP4K3Q8IVH8 894 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 KCNN1Q92952 543 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 BICD1Q96G01 975 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 PNKPQ96T60 521 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 TSEN34Q9BSV6 310 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms