RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 GHRP10912 638 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 PLS3P13797 630 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 GLRA2P23416 452 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 AXLP30530 894 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 ZNF131P52739 623 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 UBE2HP62256 183 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 TMEM62Q0P6H9 643 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 ALCAMQ13740 583 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 CAPSQ13938 189 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 QPCTQ16769 361 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 LYPD8Q6UX82 237 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 TRIM67Q6ZTA4 783 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 CCDC65Q8IXS2 484 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 ELOA2Q8IYF1 753 aaPredicted RBP9.61□□□□□ -0.87
COL28A1-205ENST00000453441 RNF149Q8NC42 400 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 ASAP3Q8TDY4 903 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 RSPH1Q8WYR4 309 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 HERVK_113Q902F9 699 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 TIGD1Q96MW7 591 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 OSMRQ99650 979 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 REEP2Q9BRK0 252 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 FDXACB1Q9BRP7 624 aaPredicted RBP9.61□□□□□ -0.87
COL28A1-205ENST00000453441 C1orf112Q9NSG2 853 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 PRMT7Q9NVM4 692 aaPredicted RBP9.61□□□□□ -0.87
COL28A1-205ENST00000453441 DACT1Q9NYF0 836 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 GINS2Q9Y248 185 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 TNRC18O15417 2968 aaPredicted RBP9.61□□□□□ -0.87
COL28A1-205ENST00000453441 SCN5AQ14524 2016 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 TET1Q8NFU7 2136 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 A0A087WWV3 80 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 PVALEFA0A1B0GWK0 134 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 LRRIQ4A6NIV6 560 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 ERLIN2O94905 339 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 SKIP12755 728 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 ZSCAN20P17040 1043 aaPredicted RBP9.6□□□□□ -0.87
COL28A1-205ENST00000453441 KCNJ6P48051 423 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 NDUFA8P51970 172 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 MAPK7Q13164 816 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 GIT2Q14161 759 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 DHX8Q14562 1220 aaKnown RBP9.6□□□□□ -0.87
COL28A1-205ENST00000453441 GPNMBQ14956 572 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 MAPK6Q16659 721 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 FAM187BQ17R55 369 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 ARSHQ5FYA8 562 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 TMEM240Q5SV17 173 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 STXBP4Q6ZWJ1 553 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 MAEAQ7L5Y9 396 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 APBB1IPQ7Z5R6 666 aaPredicted RBP9.6□□□□□ -0.87
COL28A1-205ENST00000453441 DEFB128Q7Z7B8 93 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 DAW1Q8N136 415 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 CNNM3Q8NE01 707 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 DBF4BQ8NFT6 615 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 PHOSPHO2Q8TCD6 241 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 CCDC47Q96A33 483 aaKnown RBP9.6□□□□□ -0.87
COL28A1-205ENST00000453441 HVCN1Q96D96 273 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 CHAMP1Q96JM3 812 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 SLC9A7Q96T83 725 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 C7orf25Q9BPX7 421 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 PANK2Q9BZ23 570 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 GTPBP4Q9BZE4 634 aaKnown RBP9.6□□□□□ -0.87
COL28A1-205ENST00000453441 TRIM9Q9C026 710 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 PRO3102Q9H379 93 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 ST6GALNAC4Q9H4F1 302 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 IFT122Q9HBG6 1241 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 ERVK-5Q9HDB9 667 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 GPRC5CQ9NQ84 441 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 KMT5AQ9NQR1 393 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 PADI3Q9ULW8 664 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 ST3GAL5Q9UNP4 418 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 MICAL3Q7RTP6 2002 aa9.6□□□□□ -0.87
COL28A1-205ENST00000453441 FRMD3A2A2Y4 597 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 MYMKA6NI61 221 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 CCDC169A6NNP5 214 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 INO80B-WBP1J3KQ70 363 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 KINO60870 393 aaKnown RBP9.59□□□□□ -0.87
COL28A1-205ENST00000453441 ZNF202O95125 648 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 AMHP03971 560 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 PTMSP20962 102 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 CD52P31358 61 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 NPTX2P47972 431 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 RAB27AP51159 221 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 NCKAP1LP55160 1127 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 PEX3P56589 373 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 MBTD1Q05BQ5 628 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 NFX1Q12986 1120 aaKnown RBP9.59□□□□□ -0.87
COL28A1-205ENST00000453441 STRN3Q13033 797 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 RASIP1Q5U651 963 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 KRBA2Q6ZNG9 492 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 ZNF365Q70YC5 407 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 CATSPER4Q7RTX7 472 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 FAM228AQ86W67 206 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 KSR1Q8IVT5 923 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 TDHQ8IZJ6 230 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 FMR1NBQ8N0W7 255 aaPredicted RBP9.59□□□□□ -0.87
COL28A1-205ENST00000453441 MYCT1Q8N699 235 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 LRRC15Q8TF66 581 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 TMEM40Q8WWA1 233 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL28A1-205ENST00000453441 TRAIPQ9BWF2 469 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms