RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 CPNE8Q86YQ8 564 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 KIAA0825Q8IV33 1275 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 SP8Q8IXZ3 490 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 LMO3Q8TAP4 145 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 NACC1Q96RE7 527 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 TACO1Q9BSH4 297 aaKnown RBP16.92■□□□□ 0.3
TRA2B-205ENST00000453386 NSRP1Q9H0G5 558 aaKnown RBP16.92■□□□□ 0.3
TRA2B-205ENST00000453386 WRAP73Q9P2S5 460 aaPredicted RBP16.92■□□□□ 0.3
TRA2B-205ENST00000453386 C10orf71Q711Q0 1435 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 TISP43B9A030 160 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 ATP6V1G2O95670 118 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 RARGP13631 454 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 COILP38432 576 aaPredicted RBP16.92■□□□□ 0.3
TRA2B-205ENST00000453386 LONRF1Q17RB8 773 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 ABCB5Q2M3G0 1257 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 SAMD1Q6SPF0 538 aaPredicted RBP16.92■□□□□ 0.3
TRA2B-205ENST00000453386 NOD2Q9HC29 1040 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 ACP6Q9NPH0 428 aa16.92■□□□□ 0.3
TRA2B-205ENST00000453386 PFASO15067 1338 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 PSMD10O75832 226 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 ACSL3O95573 720 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 PEX5P50542 639 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 PRELPP51888 382 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 CALCOCO2Q13137 446 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 TMEM179Q6ZVK1 233 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 DHX37Q8IY37 1157 aaKnown RBP16.91■□□□□ 0.3
TRA2B-205ENST00000453386 KAT5Q92993 513 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 POP1Q99575 1024 aaKnown RBP16.91■□□□□ 0.3
TRA2B-205ENST00000453386 ABCF3Q9NUQ8 709 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 PASKQ96RG2 1323 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 ARHGEF35A5YM69 484 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 K7ENM7 598 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 HIP1RO75146 1068 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 SGPL1O95470 568 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 MMP14P50281 582 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 HADHBP55084 474 aaKnown RBP16.91■□□□□ 0.3
TRA2B-205ENST00000453386 PPP3CAQ08209 521 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 CNGA2Q16280 664 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 MAGEC3Q8TD91 643 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 RPS6KC1Q96S38 1066 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 PCDHB18PQ96TA0 734 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 KCNQ5Q9NR82 932 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 SLC12A4Q9UP95 1085 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 PCDHA3Q9Y5H8 950 aa16.91■□□□□ 0.3
TRA2B-205ENST00000453386 RTN2O75298 545 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 RARAP10276 462 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 RFX1P22670 979 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 ZNF131P52739 623 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 SLC13A5Q86YT5 568 aaPredicted RBP16.9■□□□□ 0.3
TRA2B-205ENST00000453386 KCTD17Q8N5Z5 321 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 DDX23Q9BUQ8 820 aaKnown RBP16.9■□□□□ 0.3
TRA2B-205ENST00000453386 WNT8AQ9H1J5 351 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 VEZTQ9HBM0 779 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 LRRC4BQ9NT99 713 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 RPSAP08865 295 aaKnown RBP16.9■□□□□ 0.3
TRA2B-205ENST00000453386 VAMP7P51809 220 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 BTNL9Q6UXG8 535 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 EXOC3L1Q86VI1 746 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 ART4Q93070 314 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 MLXIPLQ9NP71 852 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 HOMER3Q9NSC5 361 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 PRR12Q9ULL5 1215 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 UBE4BO95155 1302 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 FOCADQ5VW36 1801 aa16.9■□□□□ 0.3
TRA2B-205ENST00000453386 DDX39AO00148 427 aaKnown RBP16.89■□□□□ 0.3
TRA2B-205ENST00000453386 GGPS1O95749 300 aa16.89■□□□□ 0.3
TRA2B-205ENST00000453386 GSTA1P08263 222 aa16.89■□□□□ 0.3
TRA2B-205ENST00000453386 PDE6CP51160 858 aa16.89■□□□□ 0.3
TRA2B-205ENST00000453386 VPS72Q15906 364 aa16.89■□□□□ 0.3
TRA2B-205ENST00000453386 SH3BP5LQ7L8J4 393 aa16.89■□□□□ 0.3
TRA2B-205ENST00000453386 GMCL1Q96IK5 515 aa16.89■□□□□ 0.3
TRA2B-205ENST00000453386 RUNDC3BQ96NL0 473 aa16.89■□□□□ 0.3
TRA2B-205ENST00000453386 NUP85Q9BW27 656 aa16.89■□□□□ 0.3
TRA2B-205ENST00000453386 KCNK9Q9NPC2 374 aa16.89■□□□□ 0.3
TRA2B-205ENST00000453386 ECEL1O95672 775 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 GH2P01242 217 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 PPP2R5CQ13362 524 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 SNX1Q13596 522 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 CCDC174Q6PII3 467 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 NSMFQ6X4W1 530 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 INTS8Q75QN2 995 aaKnown RBP16.89■□□□□ 0.29
TRA2B-205ENST00000453386 ANKRD42Q8N9B4 389 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 GMCL1P1Q8NEA9 526 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 ZNF564Q8TBZ8 553 aaPredicted RBP16.89■□□□□ 0.29
TRA2B-205ENST00000453386 LXNQ9BS40 222 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 ZNF577Q9BSK1 485 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 TMEM109Q9BVC6 243 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 DBNDD1Q9H9R9 158 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 FGFR1OP2Q9NVK5 253 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 DNAJC17Q9NVM6 304 aaKnown RBP16.89■□□□□ 0.29
TRA2B-205ENST00000453386 FAM198AQ9UFP1 575 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 TCP11X1B4DZS4 312 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 CYP26A1O43174 497 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 RNF207Q6ZRF8 634 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 NOP9Q86U38 636 aaKnown RBP16.89■□□□□ 0.29
TRA2B-205ENST00000453386 PPM1KQ8N3J5 372 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 C1orf54Q8WWF1 131 aa16.89■□□□□ 0.29
TRA2B-205ENST00000453386 ARHGEF2Q92974 986 aaKnown RBP16.89■□□□□ 0.29
TRA2B-205ENST00000453386 UNC45AQ9H3U1 944 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms