RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 JAKMIP1Q96N16 626 aaKnown RBP15.97■□□□□ 0.15
LYSMD3-202ENST00000453259 NAP1L4Q99733 375 aaKnown RBP15.97■□□□□ 0.15
LYSMD3-202ENST00000453259 SLC2A4RGQ9NR83 387 aa15.97■□□□□ 0.15
LYSMD3-202ENST00000453259 FNIP2Q9P278 1114 aa15.97■□□□□ 0.15
LYSMD3-202ENST00000453259 DAXXQ9UER7 740 aaPredicted RBP15.97■□□□□ 0.15
LYSMD3-202ENST00000453259 TBX3O15119 743 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 N4BP1O75113 896 aaKnown RBP15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 DEXIO95424 95 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 TDP2O95551 362 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 SSBP05455 408 aaKnown RBP eCLIP15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 P4HBP07237 508 aaKnown RBP15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 ITGA4P13612 1032 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 RPS6KB1P23443 525 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 HSPA4P34932 840 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 LAMTOR4Q0VGL1 99 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 MXD4Q14582 209 aaPredicted RBP15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 UBXN11Q5T124 520 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 NOTUMQ6P988 496 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 OTUD6AQ7L8S5 288 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 KRT25Q7Z3Z0 450 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 KSR1Q8IVT5 923 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 C4orf19Q8IY42 314 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 COLGALT2Q8IYK4 626 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 BLIDQ8IZY5 108 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 PRPF31Q8WWY3 499 aaKnown RBP15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 SMG7Q92540 1137 aaKnown RBP15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 SHDQ96IW2 340 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 TBC1D17Q9HA65 648 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 CHST7Q9NS84 486 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 MARCH5Q9NX47 278 aa15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 DDX25Q9UHL0 483 aaKnown RBP15.96■□□□□ 0.15
LYSMD3-202ENST00000453259 KRBA1A5PL33 1030 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 TMEM150BA6NC51 233 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 ARL5CA6NH57 179 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 ANHXE9PGG2 379 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 M0R2N6 131 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 STK25O00506 426 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 POMCP01189 267 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 CFHP08603 1231 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 PDIA3P30101 505 aaKnown RBP15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 PPP4R3AQ6IN85 833 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 KCNG4Q8TDN1 519 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 CEP170P1Q96L14 293 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 COLEC11Q9BWP8 271 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 KCNMB3Q9NPA1 279 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 ARHGEF3Q9NR81 526 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 GIT1Q9Y2X7 761 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 SIT1Q9Y3P8 196 aa15.95■□□□□ 0.14
LYSMD3-202ENST00000453259 C2CD2LO14523 706 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 NARSO43776 548 aaKnown RBP15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 LAMP2P13473 410 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 OR1G1P47890 313 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 SSRP1Q08945 709 aaKnown RBP15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 TFDP1Q14186 410 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 USP41Q3LFD5 358 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 PLA2G4FQ68DD2 849 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 CPLX2Q6PUV4 134 aaKnown RBP15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 FERMT3Q86UX7 667 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 RNF149Q8NC42 400 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 SMG8Q8ND04 991 aaKnown RBP15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 RUBCNQ92622 972 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 GJA10Q969M2 543 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 ZNF707Q96C28 371 aaPredicted RBP15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 SH2D3AQ9BRG2 576 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 NFKBIZQ9BYH8 718 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 PRKD2Q9BZL6 878 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 PIDD1Q9HB75 910 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 VAV3Q9UKW4 847 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 PRG3Q9Y2Y8 225 aaPredicted RBP15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 IPPQ9Y573 584 aa15.94■□□□□ 0.14
LYSMD3-202ENST00000453259 EPB41L2O43491 1005 aaKnown RBP15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 SRGAP2CP0DJJ0 459 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 YWHABP31946 246 aaKnown RBP15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 MAGEA9P43362 315 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 AFF1P51825 1210 aaKnown RBP15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 HTR4Q13639 388 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 PUM1Q14671 1186 aaKnown RBP eCLIP15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 EMC2Q15006 297 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 ZNF528Q3MIS6 628 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 C1orf210Q8IVY1 113 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 MYADMQ96S97 322 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 NT5C3AQ9H0P0 336 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 CSRNP2Q9H175 543 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 MINDY3Q9H8M7 445 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 DLGAP2Q9P1A6 1054 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 SNX14Q9Y5W7 946 aa15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 EP300Q09472 2414 aaPredicted RBP15.93■□□□□ 0.14
LYSMD3-202ENST00000453259 CPLX1O14810 134 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 TSPAN1O60635 241 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 RFPL2O75678 378 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 HNRNPA1P09651 372 aaKnown RBP eCLIP15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 CPA1P15085 419 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 SDHBP21912 280 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 HOXA9P31269 272 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 MLH1P40692 756 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 NPEPPSP55786 919 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 STARD6P59095 220 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 PTENP60484 403 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 EPHA7Q15375 998 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms