RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TYW1Q9NV66 732 aaKnown RBP9.76□□□□□ -0.85
COL8A1-203ENST00000452013 KBTBD4Q9NVX7 518 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 LMCD1Q9NZU5 365 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 MTUS1Q9ULD2 1270 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 TNFSF13BQ9Y275 285 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 STXBP5LQ9Y2K9 1186 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 GIT1Q9Y2X7 761 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 IPPQ9Y573 584 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 PCDHB13Q9Y5F0 798 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 PCDHB12Q9Y5F1 795 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 C5orf67F2Z3F1 127 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 H3BNC9 293 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 ARHGEF15O94989 841 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 ALDH2P05091 517 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 FOSL2P15408 326 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 ATF7P17544 494 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 LAG3P18627 525 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 POU3F3P20264 500 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 CTNNB1P35222 781 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 GATMP50440 423 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 RNASELQ05823 741 aaKnown RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 GPM6BQ13491 265 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 E2F4Q16254 413 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 PTPROQ16827 1216 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 SKOR2Q2VWA4 1001 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 DCAF4L1Q3SXM0 396 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 LONRF3Q496Y0 759 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 HERC4Q5GLZ8 1057 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 NOMO2Q5JPE7 1267 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 CLLU1OSQ5K130 101 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 ZPBP2Q6X784 338 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 AGMOQ6ZNB7 445 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 CDR2LQ86X02 465 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 LRRC43Q8N309 656 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 SMG8Q8ND04 991 aaKnown RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 HELQQ8TDG4 1101 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 LPPQ93052 612 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 P2RX5Q93086 422 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 DNAJC19Q96DA6 116 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 CCDC34Q96HJ3 373 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 FAM193BQ96PV7 902 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 ACO2Q99798 780 aaKnown RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 C7orf25Q9BPX7 421 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 C11orf84Q9BUA3 381 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 TARS2Q9BW92 718 aaKnown RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 EIF2AQ9BY44 585 aaKnown RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 ST6GALNAC4Q9H4F1 302 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 PDZD7Q9H5P4 517 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 RNF19AQ9NV58 838 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 PANK4Q9NVE7 773 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 PARP2Q9UGN5 583 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 PUF60Q9UHX1 559 aaKnown RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 TBX20Q9UMR3 447 aa9.75□□□□□ -0.85
COL8A1-203ENST00000452013 MRPL42Q9Y6G3 142 aaKnown RBP9.75□□□□□ -0.85
COL8A1-203ENST00000452013 FAM237AA0A1B0GTK4 181 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 A0A1B0GVL5 298 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 K7ENM7 598 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 RFXAPO00287 272 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 CLDN3O15551 220 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 NR1I2O75469 434 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 TOM1L1O75674 476 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 SLFN14P0C7P3 912 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 MCF2P10911 925 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 PFKFB1P16118 471 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 MATR3P43243 847 aaKnown RBP eCLIP9.74□□□□□ -0.85
COL8A1-203ENST00000452013 SYKP43405 635 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 ALDH7A1P49419 539 aaKnown RBP9.74□□□□□ -0.85
COL8A1-203ENST00000452013 GTF2BQ00403 316 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 KRT17Q04695 432 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 ALCAMQ13740 583 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 CNNM4Q6P4Q7 775 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 STXBP4Q6ZWJ1 553 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 ZNF720Q7Z2F6 126 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 STAMQ92783 540 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 HVCN1Q96D96 273 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 BICD1Q96G01 975 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 CHAMP1Q96JM3 812 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 ZNF558Q96NG5 402 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 GBP4Q96PP9 640 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 APOL6Q9BWW8 343 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 LMAN2LQ9H0V9 348 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 RNF39Q9H2S5 420 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 MRPL44Q9H9J2 332 aaKnown RBP9.74□□□□□ -0.85
COL8A1-203ENST00000452013 SERTAD1Q9UHV2 236 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 EXOC7Q9UPT5 735 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 INPP5FQ9Y2H2 1132 aa9.74□□□□□ -0.85
COL8A1-203ENST00000452013 PVALEFA0A1B0GWK0 134 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 TTLL13PA6NNM8 815 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 MYL1P05976 194 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 AKAP5P24588 427 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 NMT1P30419 496 aaKnown RBP9.73□□□□□ -0.85
COL8A1-203ENST00000452013 MCM4P33991 863 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 PPM1AP35813 382 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 AFMP43652 599 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 LIG4P49917 911 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 YARSP54577 528 aaKnown RBP9.73□□□□□ -0.85
COL8A1-203ENST00000452013 ASIC1P78348 528 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 UBE3AQ05086 875 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 KYAT1Q16773 422 aa9.73□□□□□ -0.85
COL8A1-203ENST00000452013 TPRNQ4KMQ1 711 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms