RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 BRAPQ7Z569 592 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 PPP2R3CQ969Q6 453 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 INTS4Q96HW7 963 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 IGSF21Q96ID5 467 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 MSLNLQ96KJ4 702 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 ZFP42Q96MM3 310 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 GAD1Q99259 594 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 APOL6Q9BWW8 343 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 PRMT7Q9NVM4 692 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-211ENST00000451964 ARID2Q68CP9 1835 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 ARL5CA6NH57 179 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 K7ELQ4 463 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 ACKR2O00590 384 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 PDCP20941 246 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 AKAP5P24588 427 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 MLH1P40692 756 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 RESTQ13127 1097 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 KCNC3Q14003 757 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 SF3A1Q15459 793 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 DUSP6Q16828 381 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 SLC27A1Q6PCB7 646 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 TMC7Q7Z402 723 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 FAM178BQ8IXR5 827 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 MRPL43Q8N983 215 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 DEPTORQ8TB45 409 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 URGCPQ8TCY9 931 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 LRRC15Q8TF66 581 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 KIFAP3Q92845 792 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 PRIMPOLQ96LW4 560 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 C2orf40Q9H1Z8 148 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 PDZD7Q9H5P4 517 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 NGRNQ9NPE2 291 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 ENTPD7Q9NQZ7 604 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 KANSL3Q9P2N6 904 aa13.64□□□□□ -0.23
CSNK1E-211ENST00000451964 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 C2orf71A6NGG8 1288 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 SFI1A8K8P3 1242 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 HIP1RO75146 1068 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 PRKCBP05771 671 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 LIG1P18858 919 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 NPTX2P47972 431 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 NDUFV1P49821 464 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 SCNN1GP51170 649 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 PRPF4BQ13523 1007 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 PPP2R5AQ15172 486 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 PTPAQ15257 358 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 MAPK6Q16659 721 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 PUS10Q3MIT2 529 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 TMEM119Q4V9L6 283 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 NT5DC1Q5TFE4 455 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 EEF1DP3Q658K8 133 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 DDX53Q86TM3 631 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 AUTS2Q8WXX7 1259 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 TMEM169Q96HH4 297 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 IFT74Q96LB3 600 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 TRIM6Q9C030 488 aaPredicted RBP13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 CXCL16Q9H2A7 254 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 KLK14Q9P0G3 267 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 BARX2Q9UMQ3 279 aaPredicted RBP13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 MTMR6Q9Y217 621 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 GIT1Q9Y2X7 761 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 CLIC4Q9Y696 253 aa13.63□□□□□ -0.23
CSNK1E-211ENST00000451964 NRP1O14786 923 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 MBTPS2O43462 519 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 CXCL14O95715 111 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 ALDH2P05091 517 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 PLA2G4BP0C869 781 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 SLC12A3P55017 1021 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 PEX3P56589 373 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 DSC1Q08554 894 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 RAD51AP2Q09MP3 1159 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 ARSHQ5FYA8 562 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 TAS1R3Q7RTX0 852 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 CABP7Q86V35 215 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 COLGALT2Q8IYK4 626 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 VPS52Q8N1B4 723 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 SYT2Q8N9I0 419 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 SNX21Q969T3 373 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 AK8Q96MA6 479 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 TMEM175Q9BSA9 504 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 ZBP1Q9H171 429 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 MARCH5Q9NX47 278 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 CD207Q9UJ71 328 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 ATG2AQ2TAZ0 1938 aa13.62□□□□□ -0.23
CSNK1E-211ENST00000451964 PLXNA4Q9HCM2 1894 aa13.61□□□□□ -0.23
CSNK1E-211ENST00000451964 NPHP3-ACAD11A0A0J9YXS1 232 aa13.61□□□□□ -0.23
CSNK1E-211ENST00000451964 CCDC169A6NNP5 214 aa13.61□□□□□ -0.23
CSNK1E-211ENST00000451964 F8W810 466 aa13.61□□□□□ -0.23
CSNK1E-211ENST00000451964 CLASP2O75122 1294 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-211ENST00000451964 BMP15O95972 392 aa13.61□□□□□ -0.23
CSNK1E-211ENST00000451964 SSBP05455 408 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSNK1E-211ENST00000451964 GUCY2CP25092 1073 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms