RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 NCLP19338 710 aaKnown RBP23.96■■□□□ 1.43
C9orf3-208ENST00000451893 TRAPPC10P48553 1259 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 AGMOQ6ZNB7 445 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 CATSPER3Q86XQ3 398 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 MRPL43Q8N983 215 aaKnown RBP23.96■■□□□ 1.43
C9orf3-208ENST00000451893 PHF7Q9BWX1 381 aaPredicted RBP23.96■■□□□ 1.43
C9orf3-208ENST00000451893 DNAJB4Q9UDY4 337 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 FAN1Q9Y2M0 1017 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 IPPQ9Y573 584 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 TDRD15B5MCY1 1934 aaKnown RBP23.95■■□□□ 1.42
C9orf3-208ENST00000451893 HOXB8P17481 243 aaPredicted RBP23.95■■□□□ 1.42
C9orf3-208ENST00000451893 GLRA2P23416 452 aa23.95■■□□□ 1.42
C9orf3-208ENST00000451893 HOXA11P31270 313 aaPredicted RBP23.95■■□□□ 1.42
C9orf3-208ENST00000451893 ARL2P36404 184 aa23.95■■□□□ 1.42
C9orf3-208ENST00000451893 SLC11A1P49279 550 aa23.95■■□□□ 1.42
C9orf3-208ENST00000451893 POU5F1BQ06416 359 aa23.95■■□□□ 1.42
C9orf3-208ENST00000451893 MCTP1Q6DN14 999 aa23.95■■□□□ 1.42
C9orf3-208ENST00000451893 MRPL10Q7Z7H8 261 aaKnown RBP23.95■■□□□ 1.42
C9orf3-208ENST00000451893 DDX53Q86TM3 631 aaKnown RBP23.95■■□□□ 1.42
C9orf3-208ENST00000451893 RNF135Q8IUD6 432 aa23.95■■□□□ 1.42
C9orf3-208ENST00000451893 VN1R2Q8NFZ6 395 aa23.95■■□□□ 1.42
C9orf3-208ENST00000451893 POLR3CQ9BUI4 534 aaPredicted RBP23.95■■□□□ 1.42
C9orf3-208ENST00000451893 CSRNP2Q9H175 543 aa23.95■■□□□ 1.42
C9orf3-208ENST00000451893 MUTYHQ9UIF7 546 aa23.95■■□□□ 1.42
C9orf3-208ENST00000451893 PRR33A8MZF0 331 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 GOLGA6L22H0YM25 854 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 MED24O75448 989 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 SSBP05455 408 aaKnown RBP eCLIP23.94■■□□□ 1.42
C9orf3-208ENST00000451893 CCT6AP40227 531 aaKnown RBP23.94■■□□□ 1.42
C9orf3-208ENST00000451893 OR1G1P47890 313 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 MBTD1Q05BQ5 628 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 PKP1Q13835 747 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 CBX2Q14781 532 aaPredicted RBP23.94■■□□□ 1.42
C9orf3-208ENST00000451893 UBXN11Q5T124 520 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 POTEGQ6S5H5 508 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 ZNF280BQ86YH2 543 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 AUTS2Q8WXX7 1259 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 TMEM175Q9BSA9 504 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 EIF2AQ9BY44 585 aaKnown RBP23.94■■□□□ 1.42
C9orf3-208ENST00000451893 ZBP1Q9H171 429 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 DBR1Q9UK59 544 aaKnown RBP23.94■■□□□ 1.42
C9orf3-208ENST00000451893 MTMR6Q9Y217 621 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 HCFC2Q9Y5Z7 792 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 STK24Q9Y6E0 443 aa23.94■■□□□ 1.42
C9orf3-208ENST00000451893 CTSAP10619 480 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 LIG1P18858 919 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 MCM4P33991 863 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 MLH1P40692 756 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 TMEM184AQ6ZMB5 413 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 ZBTB33Q86T24 672 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 TMEM173Q86WV6 379 aaPredicted RBP23.93■■□□□ 1.42
C9orf3-208ENST00000451893 DEPTORQ8TB45 409 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 FAM122AQ96E09 287 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 RPS6KC1Q96S38 1066 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 EMILIN2Q9BXX0 1053 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 C2orf40Q9H1Z8 148 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 GPRC5CQ9NQ84 441 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 PRMT7Q9NVM4 692 aaPredicted RBP23.93■■□□□ 1.42
C9orf3-208ENST00000451893 LRWD1Q9UFC0 647 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 PARP2Q9UGN5 583 aa23.93■■□□□ 1.42
C9orf3-208ENST00000451893 PRG3Q9Y2Y8 225 aaPredicted RBP23.93■■□□□ 1.42
C9orf3-208ENST00000451893 CLASP2O75122 1294 aaKnown RBP23.92■■□□□ 1.42
C9orf3-208ENST00000451893 NPTXRO95502 500 aa23.92■■□□□ 1.42
C9orf3-208ENST00000451893 SPATA31C1P0DKV0 1188 aa23.92■■□□□ 1.42
C9orf3-208ENST00000451893 ARF4P18085 180 aaPredicted RBP23.92■■□□□ 1.42
C9orf3-208ENST00000451893 RPA1P27694 616 aa23.92■■□□□ 1.42
C9orf3-208ENST00000451893 PADI6Q6TGC4 694 aa23.92■■□□□ 1.42
C9orf3-208ENST00000451893 IFNLR1Q8IU57 520 aaPredicted RBP23.92■■□□□ 1.42
C9orf3-208ENST00000451893 GAD1Q99259 594 aa23.92■■□□□ 1.42
C9orf3-208ENST00000451893 NFKBIZQ9BYH8 718 aa23.92■■□□□ 1.42
C9orf3-208ENST00000451893 HES2Q9Y543 173 aa23.92■■□□□ 1.42
C9orf3-208ENST00000451893 H3BQV1 296 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 DDHD2O94830 711 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 F13A1P00488 732 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 URODP06132 367 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 SP100P23497 879 aaPredicted RBP23.91■■□□□ 1.42
C9orf3-208ENST00000451893 NBR1Q14596 966 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 PPP2R5AQ15172 486 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 SLC27A1Q6PCB7 646 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 PPFIBP1Q86W92 1011 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 SMG8Q8ND04 991 aaKnown RBP23.91■■□□□ 1.42
C9orf3-208ENST00000451893 IFT74Q96LB3 600 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 ZSCAN16Q9H4T2 348 aaPredicted RBP23.91■■□□□ 1.42
C9orf3-208ENST00000451893 C11orf16Q9NQ32 467 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 DZANK1Q9NVP4 752 aa23.91■■□□□ 1.42
C9orf3-208ENST00000451893 ARL5CA6NH57 179 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 KLRC2P26717 231 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 SCNN1GP51170 649 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 ITIH3Q06033 890 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 CDR2LQ86X02 465 aaPredicted RBP23.9■■□□□ 1.42
C9orf3-208ENST00000451893 SNX29Q8TEQ0 813 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 PRIMPOLQ96LW4 560 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 RIPOR3Q96MK2 946 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 ADPGKQ9BRR6 497 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 MRPL17Q9NRX2 175 aaKnown RBP23.9■■□□□ 1.42
C9orf3-208ENST00000451893 GIT1Q9Y2X7 761 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 NR2E1Q9Y466 385 aa23.9■■□□□ 1.42
C9orf3-208ENST00000451893 VPS37CA5D8V6 355 aaPredicted RBP23.89■■□□□ 1.41
C9orf3-208ENST00000451893 C2CD2LO14523 706 aa23.89■■□□□ 1.41
C9orf3-208ENST00000451893 NRP1O14786 923 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms