RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 INPP5FQ9Y2H2 1132 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 GIT1Q9Y2X7 761 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 IPPQ9Y573 584 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 LAMA3Q16787 3333 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 RFXAPO00287 272 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 SLC16A4O15374 487 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 B4GALT5O43286 388 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 TRAK2O60296 914 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 NPTXRO95502 500 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 ATF7P17544 494 aaPredicted RBP13.24□□□□□ -0.29
SMPD4-212ENST00000451542 GAP43P17677 238 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 UBE3AQ05086 875 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 ADGRE1Q14246 886 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 CLLU1OSQ5K130 101 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 UBXN11Q5T124 520 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 ATF7IP2Q5U623 682 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 FAM178BQ8IXR5 827 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 DAW1Q8N136 415 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 MICALL1Q8N3F8 863 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 LPPQ93052 612 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 MRPL38Q96DV4 380 aaKnown RBP13.24□□□□□ -0.29
SMPD4-212ENST00000451542 CASD1Q96PB1 797 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 RPS6KC1Q96S38 1066 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 KIFC3Q9BVG8 833 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 PANK2Q9BZ23 570 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 CCDC113Q9H0I3 377 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 TNMDQ9H2S6 317 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 MAGEF1Q9HAY2 307 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 SEL1LQ9UBV2 794 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 PCDHA7Q9UN72 937 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 MTCH2Q9Y6C9 303 aa13.24□□□□□ -0.29
SMPD4-212ENST00000451542 ZMYM2Q9UBW7 1377 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 OFD1O75665 1012 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 GIT2Q14161 759 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
SMPD4-212ENST00000451542 LONRF3Q496Y0 759 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 ARSHQ5FYA8 562 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 KCNT2Q6UVM3 1135 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 ZPBP2Q6X784 338 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 AGMOQ6ZNB7 445 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 HAUS6Q7Z4H7 955 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 CCDC65Q8IXS2 484 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 PPM1EQ8WY54 764 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 DDX12PQ92771 950 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 BICD1Q96G01 975 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 CCDC34Q96HJ3 373 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 CCDC94Q9BW85 323 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-212ENST00000451542 APOL6Q9BWW8 343 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 EIF2AQ9BY44 585 aaKnown RBP13.23□□□□□ -0.29
SMPD4-212ENST00000451542 SPG21Q9NZD8 308 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 STK39Q9UEW8 545 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 PARP2Q9UGN5 583 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 TNFSF13BQ9Y275 285 aa13.23□□□□□ -0.29
SMPD4-212ENST00000451542 PRRC2BQ5JSZ5 2229 aaKnown RBP13.23□□□□□ -0.29
SMPD4-212ENST00000451542 NPHP3-ACAD11A0A0J9YXS1 232 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 GOLGA6L4A6NEF3 574 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 EPOPA6NHQ4 379 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 RBAK-RBAKDNI3L0D1 243 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 K7ENM7 598 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 ALDH2P05091 517 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 MAPTP10636 758 aaKnown RBP13.22□□□□□ -0.29
SMPD4-212ENST00000451542 IDEP14735 1019 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 ZNF131P52739 623 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 YARSP54577 528 aaKnown RBP13.22□□□□□ -0.29
SMPD4-212ENST00000451542 NCKAP1LP55160 1127 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
SMPD4-212ENST00000451542 ZNF568Q3ZCX4 644 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 ADALQ6DHV7 355 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 PDE12Q6L8Q7 609 aaKnown RBP13.22□□□□□ -0.29
SMPD4-212ENST00000451542 SHC4Q6S5L8 630 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 STXBP4Q6ZWJ1 553 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 DYMQ7RTS9 669 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 SPRED2Q7Z698 418 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 CDR2LQ86X02 465 aaPredicted RBP13.22□□□□□ -0.29
SMPD4-212ENST00000451542 CEP57L1Q8IYX8 460 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 KLHL23Q8NBE8 558 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 COLGALT1Q8NBJ5 622 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 SMG8Q8ND04 991 aaKnown RBP13.22□□□□□ -0.29
SMPD4-212ENST00000451542 TMEM161BQ8NDZ6 487 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 MICAL1Q8TDZ2 1067 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 LEO1Q8WVC0 666 aaPredicted RBP13.22□□□□□ -0.29
SMPD4-212ENST00000451542 KCNN1Q92952 543 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 DHX58Q96C10 678 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 TMEM169Q96HH4 297 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 TMEM175Q9BSA9 504 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 PDZD7Q9H5P4 517 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 TOPORSQ9NS56 1045 aaPredicted RBP13.22□□□□□ -0.29
SMPD4-212ENST00000451542 RNF19AQ9NV58 838 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 TBC1D13Q9NVG8 400 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 PLAGL2Q9UPG8 496 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 ZDHHC9Q9Y397 364 aa13.22□□□□□ -0.29
SMPD4-212ENST00000451542 CLDN3O15551 220 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 NCK2O43639 380 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 LPXNO60711 386 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 ZC3H11AO75152 810 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 TOM1L1O75674 476 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 FGF18O76093 207 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 MATR3P43243 847 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 LIG4P49917 911 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 PLCB3Q01970 1234 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms