RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PARP2Q9UGN5 583 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 CNTNAP2Q9UHC6 1331 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 CITO14578 2027 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 PDCD11Q14690 1871 aaKnown RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 FAM86C2PA6NEL3 165 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 ARL5CA6NH57 179 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 LAD1O00515 517 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 ZNF623O75123 536 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 EDN1P05305 212 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 GALTP07902 379 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 CYP11B2P19099 503 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 SP100P23497 879 aaPredicted RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 PRPHP41219 470 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 ATP2C1P98194 919 aaPredicted RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 SMAD4Q13485 552 aaKnown RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 PRPF4BQ13523 1007 aaKnown RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 COL19A1Q14993 1142 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 PUS10Q3MIT2 529 aaKnown RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 CDCA2Q69YH5 1023 aaPredicted RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 KCNK18Q7Z418 384 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 MRPL10Q7Z7H8 261 aaKnown RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 IFNLR1Q8IU57 520 aaPredicted RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 GJD3Q8N144 294 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 VPS52Q8N1B4 723 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 TMEM87AQ8NBN3 555 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 RABGGTAQ92696 567 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 IGSF21Q96ID5 467 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 CDK5RAP3Q96JB5 506 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 IFT74Q96LB3 600 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 MMTAG2Q9BU76 263 aaKnown RBP10.7□□□□□ -0.7
USP54-207ENST00000451492 CLEC1BQ9P126 229 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 CACNG4Q9UBN1 327 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 FAM50BQ9Y247 325 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 LZTS1Q9Y250 596 aa10.7□□□□□ -0.7
USP54-207ENST00000451492 SPDYE4A6NLX3 237 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 CCDC169A6NNP5 214 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 F8W810 466 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 C2CD2LO14523 706 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 NRP1O14786 923 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 HIP1RO75146 1068 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 EYA4O95677 639 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 CXCL14O95715 111 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 SRGAP2BP0DMP2 458 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 MUTP22033 750 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 NAMPTP43490 491 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 PEX3P56589 373 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 CACNB1Q02641 598 aaPredicted RBP10.69□□□□□ -0.7
USP54-207ENST00000451492 POU5F1BQ06416 359 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 PDIA5Q14554 519 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 DHX8Q14562 1220 aaKnown RBP10.69□□□□□ -0.7
USP54-207ENST00000451492 PPP2R5AQ15172 486 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 MAPK6Q16659 721 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 HACE1Q8IYU2 909 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 CNNM3Q8NE01 707 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 RASSF8Q8NHQ8 419 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 CCDC51Q96ER9 411 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 MSLNLQ96KJ4 702 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 RPS6KC1Q96S38 1066 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 CDCA3Q99618 268 aaPredicted RBP10.69□□□□□ -0.7
USP54-207ENST00000451492 RUSC1Q9BVN2 902 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 NFKBIZQ9BYH8 718 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 ZBP1Q9H171 429 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 PDZD7Q9H5P4 517 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 EPHX3Q9H6B9 360 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 NGRNQ9NPE2 291 aaKnown RBP10.69□□□□□ -0.7
USP54-207ENST00000451492 MIOSQ9NXC5 875 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 CDH22Q9UJ99 828 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 DNM3Q9UQ16 869 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 FAN1Q9Y2M0 1017 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 GTF3C3Q9Y5Q9 886 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 STK24Q9Y6E0 443 aa10.69□□□□□ -0.7
USP54-207ENST00000451492 DENND4AQ7Z401 1863 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 C2orf71A6NGG8 1288 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 N4BP3O15049 544 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 HARSP12081 509 aaKnown RBP10.68□□□□□ -0.7
USP54-207ENST00000451492 CEBPZQ03701 1054 aaKnown RBP10.68□□□□□ -0.7
USP54-207ENST00000451492 ZP2Q05996 745 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 CUL4AQ13619 759 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 PCBP1Q15365 356 aaKnown RBP eCLIP10.68□□□□□ -0.7
USP54-207ENST00000451492 SMAD2Q15796 467 aaKnown RBP10.68□□□□□ -0.7
USP54-207ENST00000451492 EEF1DP3Q658K8 133 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 PDE12Q6L8Q7 609 aaKnown RBP10.68□□□□□ -0.7
USP54-207ENST00000451492 PPP4R3CPQ6ZMV5 832 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 CABP7Q86V35 215 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 SMRP1Q8NCR6 262 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 HASPINQ8TF76 798 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 KIFAP3Q92845 792 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 PRIMPOLQ96LW4 560 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 PNMA5Q96PV4 448 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 ADPGKQ9BRR6 497 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 VN1R3Q9BXE9 311 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 CCDC113Q9H0I3 377 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 UBN1Q9NPG3 1134 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 SNTG2Q9NY99 539 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 KANSL3Q9P2N6 904 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 RAPGEFL1Q9UHV5 662 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 GDAQ9Y2T3 454 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 USP15Q9Y4E8 981 aaPredicted RBP10.68□□□□□ -0.7
USP54-207ENST00000451492 VWA8A3KMH1 1905 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms