RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CCT6AP40227 531 aaKnown RBP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 ALDH7A1P49419 539 aaKnown RBP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 AFF1P51825 1210 aaKnown RBP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 RNASELQ05823 741 aaKnown RBP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 MBTD1Q05BQ5 628 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 ECM1Q16610 540 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 TMC7Q7Z402 723 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 MRPL10Q7Z7H8 261 aaKnown RBP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 EIF2AQ9BY44 585 aaKnown RBP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 EPHX3Q9H6B9 360 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 NRDE2Q9H7Z3 1164 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 POLD4Q9HCU8 107 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 TBC1D13Q9NVG8 400 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 FAM13BQ9NYF5 915 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 CLEC1BQ9P126 229 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 LRWD1Q9UFC0 647 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 CD207Q9UJ71 328 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 DBR1Q9UK59 544 aaKnown RBP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 BARX2Q9UMQ3 279 aaPredicted RBP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 LZTS1Q9Y250 596 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 HIDE1A8MVS5 230 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 B4GALT5O43286 388 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 MBTPS2O43462 519 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 GLP2RO95838 553 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 SSTR3P32745 418 aaPredicted RBP18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 PADI6Q6TGC4 694 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 CDR2LQ86X02 465 aaPredicted RBP18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 ZNF280BQ86YH2 543 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 IFNLR1Q8IU57 520 aaPredicted RBP18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 IGSF22Q8N9C0 903 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 SMG8Q8ND04 991 aaKnown RBP18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 CSRNP2Q9H175 543 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 RSAD1Q9HA92 442 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 DNAJB4Q9UDY4 337 aa18.83■□□□□ 0.6
PRPF40A-204ENST00000450303 A0A1W2PQ27 194 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 A0A1W2PQ64 194 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 A0A1W2PQD8 194 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 ARHGEF35A5YM69 484 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 LRRIQ4A6NIV6 560 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 SLC26A4O43511 780 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 TRAK2O60296 914 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 B4GALT3O60512 393 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 ITGA4P13612 1032 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 CA8P35219 290 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 UBA7P41226 1012 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 UBE2HP62256 183 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 POU5F1BQ06416 359 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 NCBP1Q09161 790 aaKnown RBP18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 IL17AQ16552 155 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 AMHR2Q16671 573 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 DUSP6Q16828 381 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 KRT79Q5XKE5 535 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 HAUS3Q68CZ6 603 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 PDE12Q6L8Q7 609 aaKnown RBP18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 TMEM173Q86WV6 379 aaPredicted RBP18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 GJD3Q8N144 294 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 VN1R2Q8NFZ6 395 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 MSLNLQ96KJ4 702 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 CLIC6Q96NY7 704 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 APOL6Q9BWW8 343 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 KIAA1024Q9UPX6 916 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 FAM50BQ9Y247 325 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 HES2Q9Y543 173 aa18.82■□□□□ 0.6
PRPF40A-204ENST00000450303 PP2D1A8MPX8 630 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 DDHD2O94830 711 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 POMCP01189 267 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 GALTP07902 379 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 ARF4P18085 180 aaPredicted RBP18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 CMA1P23946 247 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 CDC25AP30304 524 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 AXLP30530 894 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 SLC11A1P49279 550 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 AXDND1Q5T1B0 1012 aaPredicted RBP18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 LLGL2Q6P1M3 1020 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 NOTUMQ6P988 496 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 MCPH1Q8NEM0 835 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 URGCPQ8TCY9 931 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 SNX29Q8TEQ0 813 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 BCL7CQ8WUZ0 217 aaPredicted RBP18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 BSNDQ8WZ55 320 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 TMEM169Q96HH4 297 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 CCDC39Q9UFE4 941 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 IPPQ9Y573 584 aa18.81■□□□□ 0.6
PRPF40A-204ENST00000450303 CYP11B2P19099 503 aa18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 SMAD4Q13485 552 aaKnown RBP18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 TPRNQ4KMQ1 711 aa18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 L1TD1Q5T7N2 865 aaKnown RBP18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 RASSF8Q8NHQ8 419 aa18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 AUTS2Q8WXX7 1259 aa18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 CALML4Q96GE6 196 aa18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 PYM1Q9BRP8 204 aaKnown RBP18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 BHMT2Q9H2M3 363 aa18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 NGRNQ9NPE2 291 aaKnown RBP18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 DDX19AQ9NUU7 478 aaKnown RBP18.8■□□□□ 0.6
PRPF40A-204ENST00000450303 MUC3AQ02505 3323 aa18.79■□□□□ 0.6
PRPF40A-204ENST00000450303 CNTNAP2Q9UHC6 1331 aa18.79■□□□□ 0.6
PRPF40A-204ENST00000450303 E9PMD0 336 aa18.79■□□□□ 0.6
PRPF40A-204ENST00000450303 NPTXRO95502 500 aa18.79■□□□□ 0.6
PRPF40A-204ENST00000450303 CXCL14O95715 111 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms