RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 CAMK1Q14012 370 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 STK38Q15208 465 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 FAM187BQ17R55 369 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 FOXD4L6Q3SYB3 417 aaPredicted RBP13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 SLC27A1Q6PCB7 646 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 FOXD4L3Q6VB84 417 aaPredicted RBP13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 MRPL10Q7Z7H8 261 aaKnown RBP13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 GPBP1Q86WP2 473 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 HACE1Q8IYU2 909 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 KCTD17Q8N5Z5 321 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 SYT2Q8N9I0 419 aaPredicted RBP13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 LRRC15Q8TF66 581 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 RSPH1Q8WYR4 309 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 HLA-CQ95604 372 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 EPSTI1Q96J88 318 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 CLIC6Q96NY7 704 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 TIPINQ9BVW5 301 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 GBP3Q9H0R5 595 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 FZD8Q9H461 694 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 PCDHGC5Q9Y5F6 944 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 XIRP2A4UGR9 3374 aa13.16□□□□□ -0.3
LSP1P3-201ENST00000449530 A0A1B0GUA9 196 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 SFI1A8K8P3 1242 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 N4BP3O15049 544 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 B4GALT3O60512 393 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 F13A1P00488 732 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 POMCP01189 267 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 TXLNAP40222 546 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 MLH1P40692 756 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 EFNA5P52803 228 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 BCAR1P56945 870 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 SLC39A14Q15043 492 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 SLC39A11Q8N1S5 342 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 KRI1Q8N9T8 703 aaKnown RBP13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 RAD54LQ92698 747 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 ZNF396Q96N95 335 aaPredicted RBP13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 UBE2ZQ9H832 354 aaPredicted RBP13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 KMT5AQ9NQR1 393 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 BLOC1S4Q9NUP1 217 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 SPG21Q9NZD8 308 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 COG5Q9UP83 839 aa13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
LSP1P3-201ENST00000449530 ARL5CA6NH57 179 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 NT5C1B-RDH14C9J2C7 533 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 ACKR2O00590 384 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 SLC16A4O15374 487 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 KRT18P05783 430 aaKnown RBP13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 AKAP5P24588 427 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 KCNQ1P51787 676 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 AFF1P51825 1210 aaKnown RBP13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 UBE3AQ05086 875 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 MCM6Q14566 821 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 EEF1DP3Q658K8 133 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 EP400NLQ6ZTU2 488 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 TMEM173Q86WV6 379 aaPredicted RBP13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 MRPS27Q92552 414 aaKnown RBP13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 ZFP42Q96MM3 310 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 NECAB3Q96P71 396 aaPredicted RBP13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 GAD1Q99259 594 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 REEP2Q9BRK0 252 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 CCSER1Q9C0I3 900 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 NRDE2Q9H7Z3 1164 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 ENTPD7Q9NQZ7 604 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 TLR9Q9NR96 1032 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 KCND2Q9NZV8 630 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 ARHGAP28Q9P2N2 729 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 DNAJB4Q9UDY4 337 aa13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 TCF20Q9UGU0 1960 aaKnown RBP13.14□□□□□ -0.31
LSP1P3-201ENST00000449530 K7ERI5 159 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 PLS3P13797 630 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 KCNA5P22460 613 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 GTF2F1P35269 517 aaKnown RBP eCLIP13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 SLC11A1P49279 550 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 ALDH7A1P49419 539 aaKnown RBP13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 SCNN1GP51170 649 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 PLCB3Q01970 1234 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 HYAL1Q12794 435 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 ARSHQ5FYA8 562 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 NT5DC1Q5TFE4 455 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 ATF7IP2Q5U623 682 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 PLPP4Q5VZY2 271 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 ZNF280BQ86YH2 543 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 MICAL1Q8TDZ2 1067 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 BCL7CQ8WUZ0 217 aaPredicted RBP13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 PPP2R3CQ969Q6 453 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 TMEM169Q96HH4 297 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 FAM193BQ96PV7 902 aaPredicted RBP13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 ADPGKQ9BRR6 497 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 LRFN3Q9BTN0 628 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 IGFLR1Q9H665 355 aa13.13□□□□□ -0.31
LSP1P3-201ENST00000449530 UBN1Q9NPG3 1134 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms