RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 CLDN3O15551 220 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 IRF1P10914 325 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 ESRRAP11474 423 aaPredicted RBP11.21□□□□□ -0.62
PRDM15-208ENST00000449395 ST8SIA6P61647 398 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 NR1H3Q13133 447 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 KLC3Q6P597 504 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 FGD4Q96M96 766 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 BPIFA3Q9BQP9 254 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 SAYSD1Q9NPB0 183 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 C17orf102A2RUQ5 167 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 LRRC53A6NM62 1247 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 SNAP23O00161 211 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 INPP1P49441 399 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 COASYQ13057 564 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 PPP4R4Q6NUP7 873 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 RWDD4Q6NW29 188 aaKnown RBP11.21□□□□□ -0.62
PRDM15-208ENST00000449395 KLC2Q9H0B6 622 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 USP18Q9UMW8 372 aa11.21□□□□□ -0.62
PRDM15-208ENST00000449395 MAPK13O15264 365 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 GPC5P78333 572 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 GFPT1Q06210 699 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 USP17L6PQ6QN14 398 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 XXYLT1Q8NBI6 393 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 SRPK1Q96SB4 655 aaKnown RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 TAF1DQ9H5J8 278 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 KIAA1586Q9HCI6 787 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 WDR64B1ANS9 1081 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 E9PMD0 336 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 SLC25A27O95847 323 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 HSPA8P11142 646 aaKnown RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 FOSL2P15408 326 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 DGKDQ16760 1214 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 PADI6Q6TGC4 694 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 TRIM67Q6ZTA4 783 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 MCPH1Q8NEM0 835 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 DRC3Q9H069 523 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 GCLMP48507 274 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 KCNH2Q12809 1159 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 HP1BP3Q5SSJ5 553 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 PASD1Q8IV76 773 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 FMR1NBQ8N0W7 255 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 MIF4GDA9UHW6 222 aaKnown RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 CFLARO15519 480 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 PNMA6AP0CW24 399 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 PPP6R3Q5H9R7 873 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 NUGGCQ68CJ6 796 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 TEX2Q8IWB9 1127 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 DHX38Q92620 1227 aaKnown RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 RBM41Q96IZ5 413 aaKnown RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 SNX24Q9Y343 169 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 UTYO14607 1347 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 ZRANB2O95218 330 aaKnown RBP eCLIP11.2□□□□□ -0.625e-6■■■■■ 32.6
PRDM15-208ENST00000449395 CEP95Q96GE4 821 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 DYDC2Q96IM9 177 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 SERPINI1Q99574 410 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 TMEM260Q9NX78 707 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 PVALEFA0A1B0GWK0 134 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 SRRM1Q8IYB3 904 aaKnown RBP11.2□□□□□ -0.62
PRDM15-208ENST00000449395 CXorf38Q8TB03 319 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 FAM20AQ96MK3 541 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 NCDNQ9UBB6 729 aa11.2□□□□□ -0.62
PRDM15-208ENST00000449395 ABCB11O95342 1321 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 MAPK6Q16659 721 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 RCSD1Q6JBY9 416 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 CRLF3Q8IUI8 442 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 MB21D2Q8IYB1 491 aaPredicted RBP11.19□□□□□ -0.62
PRDM15-208ENST00000449395 TMEM35BQ8NCS4 154 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 MMTAG2Q9BU76 263 aaKnown RBP11.19□□□□□ -0.62
PRDM15-208ENST00000449395 HEMGNQ9BXL5 484 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 DISP2A7MBM2 1401 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 RCAN1P53805 252 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 ARL4CP56559 192 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 SPARCL1Q14515 664 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 GRM4Q14833 912 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 SPDYE1Q8NFV5 336 aaPredicted RBP11.19□□□□□ -0.62
PRDM15-208ENST00000449395 CALR3Q96L12 384 aaKnown RBP11.19□□□□□ -0.62
PRDM15-208ENST00000449395 CCDC138Q96M89 665 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
PRDM15-208ENST00000449395 TBC1D22BQ9NU19 505 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 CNTNAP4Q9C0A0 1308 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 SLC16A4O15374 487 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 APOEP02649 317 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 PAMP19021 973 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 CDC27P30260 824 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 CIITAP33076 1130 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 KNOP1Q1ED39 458 aaKnown RBP11.19□□□□□ -0.62
PRDM15-208ENST00000449395 ZNF699Q32M78 642 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 SLC44A5Q8NCS7 719 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 FAM213AQ9BRX8 229 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 ANGPTL2Q9UKU9 493 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 INTUQ9ULD6 942 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 POTECB2RU33 542 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 CHEK2O96017 543 aa11.19□□□□□ -0.62
PRDM15-208ENST00000449395 URODP06132 367 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms