RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 KIF23Q02241 960 aaPredicted RBP13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 TUBB8Q3ZCM7 444 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 EFCAB12Q6NXP0 572 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 VPS11Q9H270 941 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 STN1Q9H668 368 aaKnown RBP13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 SPTLC3Q9NUV7 552 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 ABI2Q9NYB9 513 aaPredicted RBP13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 ZSCAN9O15535 394 aaPredicted RBP13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 TWF1Q12792 350 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 RAD54LQ92698 747 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 NHEJ1Q9H9Q4 299 aaPredicted RBP13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 GOLGA8KD6RF30 607 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 NDUFB5O43674 189 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 EEF1B2P24534 225 aaKnown RBP13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 STYK1Q6J9G0 422 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 PDIK1LQ8N165 341 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 NEK9Q8TD19 979 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 USP33Q8TEY7 942 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 EPB41L5Q9HCM4 733 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 AATKQ6ZMQ8 1374 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 PFASO15067 1338 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 PGRMC1O00264 195 aaKnown RBP13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 HARS2P49590 506 aaKnown RBP13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 RGS7P49802 495 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 PKN3Q6P5Z2 889 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 IQANK1A0A1B0GTG1 560 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 AGRPO00253 132 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 ALDH1A2O94788 518 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 RWDD2BP57060 319 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 CCDC15Q0P6D6 951 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 C10orf120Q5SQS8 335 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 TAGAPQ8N103 731 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 THAP9Q9H5L6 903 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 OAS2P29728 719 aaKnown RBP13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 KCTD16Q68DU8 428 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 COLEC11Q9BWP8 271 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 SRPRBQ9Y5M8 271 aaKnown RBP13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 RASGRF2O14827 1237 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 ATP9BO43861 1147 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 VEGFAP15692 232 aaPredicted RBP13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 IFNAR1P17181 557 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 HSD17B4P51659 736 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 TKFCQ3LXA3 575 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 PCDHA13Q9Y5I0 950 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 MAGI2Q86UL8 1455 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 NPTXRO95502 500 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 WEE1P30291 646 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 PFKFB3Q16875 520 aaPredicted RBP13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 LRRC71Q8N4P6 559 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 ZCWPW1Q9H0M4 648 aa13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 INTS9Q9NV88 658 aaKnown RBP13.53□□□□□ -0.24
AC006001.3-201ENST00000449307 ZC3H11AO75152 810 aaKnown RBP eCLIP13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 EFNA5P52803 228 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 BFSP2Q13515 415 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 NAALADL2Q58DX5 795 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 DCP1BQ8IZD4 617 aaKnown RBP13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 LPAR1Q92633 364 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 SLC38A7Q9NVC3 462 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 EPB42P16452 691 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 LRRC63Q05C16 580 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 ZC3H12BQ5HYM0 836 aaKnown RBP13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 RRM2BQ7LG56 351 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 PLEKHH3Q7Z736 793 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 RNF25Q96BH1 459 aaPredicted RBP13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 L3MBTL1Q9Y468 752 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 IPPQ9Y573 584 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 RPAP1Q9BWH6 1393 aaPredicted RBP13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 SAMD9LQ8IVG5 1584 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 SMARCA1P28370 1054 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 CENPAP49450 140 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 PHKG1Q16816 387 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 TDRD10Q5VZ19 366 aaKnown RBP13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 ITPRIPL1Q6GPH6 555 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 TBC1D10CQ8IV04 446 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 ZNF507Q8TCN5 953 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 ATXN7L3BQ96GX2 97 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 FAM84BQ96KN1 310 aaPredicted RBP13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 XAB2Q9HCS7 855 aaKnown RBP13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.24
AC006001.3-201ENST00000449307 H0Y626 953 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 TMEM259Q4ZIN3 620 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 SCYL3Q8IZE3 742 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 NDST4Q9H3R1 872 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 SCHIP1Q9P0W5 487 aaPredicted RBP13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 E2F6O75461 281 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 SLFN14P0C7P3 912 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 COASYQ13057 564 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 SAYSD1Q9NPB0 183 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 PCDHB12Q9Y5F1 795 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 ABCA8O94911 1581 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 RGL2O15211 777 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 CCNE1P24864 410 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 RPS12P25398 132 aaKnown RBP13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 CAPZA2P47755 286 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 GRM4Q14833 912 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms