RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 TLE2Q04725 743 aa16■□□□□ 0.15
TNF-208ENST00000449264 FAM187BQ17R55 369 aa16■□□□□ 0.15
TNF-208ENST00000449264 ATF7IP2Q5U623 682 aa16■□□□□ 0.15
TNF-208ENST00000449264 CDKAL1Q5VV42 579 aa16■□□□□ 0.15
TNF-208ENST00000449264 ZPBP2Q6X784 338 aa16■□□□□ 0.15
TNF-208ENST00000449264 ZBTB33Q86T24 672 aa16■□□□□ 0.15
TNF-208ENST00000449264 SAAL1Q96ER3 474 aa16■□□□□ 0.15
TNF-208ENST00000449264 CNOT6LQ96LI5 555 aaKnown RBP16■□□□□ 0.15
TNF-208ENST00000449264 ACO2Q99798 780 aaKnown RBP16■□□□□ 0.15
TNF-208ENST00000449264 TCHPQ9BT92 498 aa16■□□□□ 0.15
TNF-208ENST00000449264 HSPBP1Q9NZL4 362 aa16■□□□□ 0.15
TNF-208ENST00000449264 CGNQ9P2M7 1197 aaKnown RBP16■□□□□ 0.15
TNF-208ENST00000449264 MAGEC2Q9UBF1 373 aaPredicted RBP16■□□□□ 0.15
TNF-208ENST00000449264 TANC1Q9C0D5 1861 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 DCDC2CA8MYV0 355 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 KCNJ18B7U540 433 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 EXOC3O60645 756 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 ZNF18P17022 549 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 ARF4P18085 180 aaPredicted RBP15.99■□□□□ 0.15
TNF-208ENST00000449264 CASP4P49662 377 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 SNRPFP62306 86 aaKnown RBP15.99■□□□□ 0.15
TNF-208ENST00000449264 KCNJ12Q14500 433 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 ZNF568Q3ZCX4 644 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 CCDC40Q4G0X9 1142 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 ANKRD33Q7Z3H0 272 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 FAM114A1Q8IWE2 563 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 CCDC155Q8N6L0 562 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 CAGE1Q8TC20 777 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 CEP63Q96MT8 703 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 MSTO1Q9BUK6 570 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 NOC2LQ9Y3T9 749 aaKnown RBP15.99■□□□□ 0.15
TNF-208ENST00000449264 GOLGA8IPA6NC78 632 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 GOLGA8JA6NMD2 632 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 TULP1O00294 542 aaPredicted RBP15.99■□□□□ 0.15
TNF-208ENST00000449264 CLDN3O15551 220 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 CAND2O75155 1236 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 RPS6KA5O75582 802 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 TOM1L1O75674 476 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 GHRP10912 638 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 NFIL3Q16649 462 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 LRRC26Q2I0M4 334 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 UVSSAQ2YD98 709 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 EEF1DP3Q658K8 133 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 TSHZ1Q6ZSZ6 1077 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 FAM228AQ86W67 206 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 IRF2BP1Q8IU81 584 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 C12orf56Q8IXR9 622 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 ZC3H3Q8IXZ2 948 aaKnown RBP15.99■□□□□ 0.15
TNF-208ENST00000449264 ZSWIM2Q8NEG5 633 aa15.99■□□□□ 0.15
TNF-208ENST00000449264 PIN4Q9Y237 131 aaKnown RBP15.99■□□□□ 0.15
TNF-208ENST00000449264 AKAP3O75969 853 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 EPB41P11171 864 aaKnown RBP15.98■□□□□ 0.15
TNF-208ENST00000449264 CAPN2P17655 700 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 GARTP22102 1010 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 MRE11P49959 708 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 NCBP1Q09161 790 aaKnown RBP15.98■□□□□ 0.15
TNF-208ENST00000449264 BFSP2Q13515 415 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 NOLC1Q14978 699 aaKnown RBP eCLIP15.98■□□□□ 0.15
TNF-208ENST00000449264 TCP11X2Q5H9J9 407 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 C1orf53Q5VUE5 145 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 SLFN12LQ6IEE8 588 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 MPZL3Q6UWV2 235 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 SLC9A9Q8IVB4 645 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 XXYLT1Q8NBI6 393 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 RDH13Q8NBN7 331 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 HAPLN2Q9GZV7 340 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 PDZD7Q9H5P4 517 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 DMAC2Q9NW81 257 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 FRMD4BQ9Y2L6 1034 aa15.98■□□□□ 0.15
TNF-208ENST00000449264 SERPINC1P01008 464 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 MTIF2P46199 727 aaKnown RBP15.97■□□□□ 0.15
TNF-208ENST00000449264 SPAG1Q07617 926 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 FAAP100Q0VG06 881 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 NFX1Q12986 1120 aaKnown RBP15.97■□□□□ 0.15
TNF-208ENST00000449264 PCBP1Q15365 356 aaKnown RBP eCLIP15.97■□□□□ 0.15
TNF-208ENST00000449264 FBXO47Q5MNV8 452 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 LRRC8DQ7L1W4 858 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 FAM186BQ8IYM0 893 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 ANKRD20A12PQ8NF67 263 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 TOX2Q96NM4 488 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 OSBPL7Q9BZF2 842 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 PPP1R12CQ9BZL4 782 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 AGPAT5Q9NUQ2 364 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 AGO2Q9UKV8 859 aaKnown RBP15.97■□□□□ 0.15
TNF-208ENST00000449264 TNFSF13BQ9Y275 285 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 STYXL1Q9Y6J8 313 aa15.97■□□□□ 0.15
TNF-208ENST00000449264 SCN5AQ14524 2016 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 A0A0B4J269 797 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 N4BP3O15049 544 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 SLC16A3O15427 465 aaKnown RBP15.96■□□□□ 0.15
TNF-208ENST00000449264 GNA14O95837 355 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 SELPP16109 830 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 PROZP22891 400 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 EEF1GP26641 437 aaKnown RBP15.96■□□□□ 0.15
TNF-208ENST00000449264 CD52P31358 61 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 PSMC2P35998 433 aaKnown RBP15.96■□□□□ 0.15
TNF-208ENST00000449264 PAK2Q13177 524 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 MYBPC2Q14324 1141 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 LPIN1Q14693 890 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 KRT31Q15323 416 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms