RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ARL5CA6NH57 179 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 H3BQ06 376 aaPredicted RBP15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 STX6O43752 255 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 HIP1RO75146 1068 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 EFEMP2O95967 443 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 NPTX2P47972 431 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 SLC11A1P49279 550 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 EFNA5P52803 228 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 PPP2R5AQ15172 486 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 USP49Q70CQ1 688 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 TAS1R3Q7RTX0 852 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 CABP7Q86V35 215 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 IGSF21Q96ID5 467 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 NECAB3Q96P71 396 aaPredicted RBP15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 GAD1Q99259 594 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 KIFC3Q9BVG8 833 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 VN1R3Q9BXE9 311 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 NT5C3AQ9H0P0 336 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 NXF3Q9H4D5 531 aaKnown RBP15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 PDZD7Q9H5P4 517 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 BLOC1S4Q9NUP1 217 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 CLEC1BQ9P126 229 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 PUF60Q9UHX1 559 aaKnown RBP15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 INPP5FQ9Y2H2 1132 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 GIT1Q9Y2X7 761 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 ATG2AQ2TAZ0 1938 aa15.54■□□□□ 0.08
RTFDC1-204ENST00000449062 SFI1A8K8P3 1242 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 HIDE1A8MVS5 230 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 NPTXRO95502 500 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 PRKCBP05771 671 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 PLA2G4BP0C869 781 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 KRT17Q04695 432 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 DSC1Q08554 894 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 MAPK6Q16659 721 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 EEF1DP3Q658K8 133 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 ZBTB8OSQ8IWT0 167 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 COLGALT2Q8IYK4 626 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 MRPL43Q8N983 215 aaKnown RBP15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 VN1R2Q8NFZ6 395 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 DEPTORQ8TB45 409 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 MICAL1Q8TDZ2 1067 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 MSLNLQ96KJ4 702 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 IFT74Q96LB3 600 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 ZFP42Q96MM3 310 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 TIPINQ9BVW5 301 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 CCSER1Q9C0I3 900 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 IGFLR1Q9H665 355 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 C17orf75Q9HAS0 396 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 PTPRHQ9HD43 1115 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 NGRNQ9NPE2 291 aaKnown RBP15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 CLDND1Q9NY35 253 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 ARHGAP28Q9P2N2 729 aa15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 FBXO2Q9UK22 296 aaPredicted RBP15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 SRPRBQ9Y5M8 271 aaKnown RBP15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 TCF20Q9UGU0 1960 aaKnown RBP15.53■□□□□ 0.08
RTFDC1-204ENST00000449062 PLXNA4Q9HCM2 1894 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 CARNS1A5YM72 827 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 K7ERI5 159 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 PER2O15055 1255 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 ZC3H11AO75152 810 aaKnown RBP eCLIP15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 TBX10O75333 385 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 CSPG5O95196 566 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 GLP2RO95838 553 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 POMCP01189 267 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 ALDH2P05091 517 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 AKAP5P24588 427 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 UBA7P41226 1012 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 NRIP1P48552 1158 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 PEX3P56589 373 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 PRPF4BQ13523 1007 aaKnown RBP15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 SLC39A14Q15043 492 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 ZRSR1Q15695 479 aaKnown RBP15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 DUSP6Q16828 381 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 TMEM184AQ6ZMB5 413 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 DDX53Q86TM3 631 aaKnown RBP15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 RBM23Q86U06 439 aaKnown RBP15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 SPIRE2Q8WWL2 714 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 KCNN1Q92952 543 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 EPSTI1Q96J88 318 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 USP28Q96RU2 1077 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 UHRF1Q96T88 793 aaPredicted RBP15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 TMEM175Q9BSA9 504 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 CXCL16Q9H2A7 254 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 ZSCAN16Q9H4T2 348 aaPredicted RBP15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 TMEM134Q9H6X4 195 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 TLE6Q9H808 572 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 KCND2Q9NZV8 630 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 IRAK3Q9Y616 596 aa15.52■□□□□ 0.08
RTFDC1-204ENST00000449062 NPHP3-ACAD11A0A0J9YXS1 232 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 C2orf71A6NGG8 1288 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 ABLIM1O14639 778 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 NRP1O14786 923 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 LILRB3O75022 631 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 MARCKSP29966 332 aaPredicted RBP15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 RBM10P98175 930 aaKnown RBP15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 RNASELQ05823 741 aaKnown RBP15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 PTCRAQ6ISU1 281 aaPredicted RBP15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 FAM178BQ8IXR5 827 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 URGCPQ8TCY9 931 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 DRC1Q96MC2 740 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms