RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 URGCPQ8TCY9 931 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 TCP11Q8WWU5 503 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 PSPC1Q8WXF1 523 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 LPPQ93052 612 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 AGPAT5Q9NUQ2 364 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 PCDHB2Q9Y5E7 798 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 BAG4O95429 457 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 AVPR2P30518 371 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 NPEPPSP55786 919 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 PTPAQ15257 358 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 PLA2G4FQ68DD2 849 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 SLFN12Q8IYM2 578 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 C4orf32Q8N8J7 132 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 CNNM3Q8NE01 707 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 PRSS33Q8NF86 280 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 PRPF31Q8WWY3 499 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 ZNF396Q96N95 335 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 FAM193BQ96PV7 902 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 POMKQ9H5K3 350 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 UBN1Q9NPG3 1134 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 VAV3Q9UKW4 847 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 SORCS3Q9UPU3 1222 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 USTQ9Y2C2 406 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 INPP5FQ9Y2H2 1132 aa15.27■□□□□ 0.04
PDLIM2-213ENST00000448520 CNTNAP2Q9UHC6 1331 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 NEMFO60524 1076 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 SRGAP2CP0DJJ0 459 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 NCBP1Q09161 790 aaKnown RBP15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 LAMTOR4Q0VGL1 99 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 PTGDRQ13258 359 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 KIAA1841Q6NSI8 718 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 AGMOQ6ZNB7 445 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 ZDHHC14Q8IZN3 488 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 KREMEN2Q8NCW0 462 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 SLC22A17Q8WUG5 538 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 HAS1Q92839 578 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 TMEM175Q9BSA9 504 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 EMILIN2Q9BXX0 1053 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 ZSWIM4Q9H7M6 989 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 FAN1Q9Y2M0 1017 aa15.26■□□□□ 0.03
PDLIM2-213ENST00000448520 MEIS3P2A8K0S8 358 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 MARCKSP29966 332 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 AXLP30530 894 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 YWHABP31946 246 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 SLC11A1P49279 550 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 NASPP49321 788 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 GRIN1Q05586 938 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 MTMR3Q13615 1198 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 MXD4Q14582 209 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 IL17AQ16552 155 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 RARS2Q5T160 578 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 CABP7Q86V35 215 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 TMEM173Q86WV6 379 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 TMEM143Q96AN5 459 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 LXNQ9BS40 222 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 GBP3Q9H0R5 595 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 RSAD1Q9HA92 442 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 DBR1Q9UK59 544 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 SSX2IPQ9Y2D8 614 aa15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 PTPRZ1P23471 2315 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-213ENST00000448520 C2CD4DB7Z1M9 353 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 OR52Z1P0C646 297 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 SP100P23497 879 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 KRT85P78386 507 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 ATP2C1P98194 919 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 POU5F1BQ06416 359 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 TCF15Q12870 199 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 STK38Q15208 465 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 CALCRLQ16602 461 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 XKR9Q5GH70 373 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 C12orf76Q8N812 135 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 ZNF579Q8NAF0 562 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 TDRD5Q8NAT2 981 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 RNF149Q8NC42 400 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 LINC00301Q8NCQ3 95 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 LEO1Q8WVC0 666 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 AUTS2Q8WXX7 1259 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 MTMR9Q96QG7 549 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 RGL1Q9NZL6 768 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 WRAP73Q9P2S5 460 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 DNAJB4Q9UDY4 337 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 ATP6V1DQ9Y5K8 247 aa15.24■□□□□ 0.03
PDLIM2-213ENST00000448520 DDHD2O94830 711 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 ERLIN2O94905 339 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 SLITRK3O94933 977 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 EPCAMP16422 314 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 KLRC2P26717 231 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 TXKP42681 527 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 EMC2Q15006 297 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 UBXN11Q5T124 520 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 NCAPH2Q6IBW4 605 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 TPH2Q8IWU9 490 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 ACSF2Q96CM8 615 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 CCDC51Q96ER9 411 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 DYDC2Q96IM9 177 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms