RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 USP25Q9UHP3 1055 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 MYH9P35579 1960 aaKnown RBP11.24□□□□□ -0.61
LIN54-203ENST00000446851 COL1A2P08123 1366 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 CASTOR2A6NHX0 329 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 PTMSP20962 102 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 GUCY2CP25092 1073 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 ZNF410Q86VK4 478 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 DAW1Q8N136 415 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 CSGALNACT2Q8N6G5 542 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 NELFBQ8WX92 580 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 CLSTN2Q9H4D0 955 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 KBTBD4Q9NVX7 518 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 TMEM63CQ9P1W3 806 aa11.24□□□□□ -0.61
LIN54-203ENST00000446851 AGO2Q9UKV8 859 aaKnown RBP11.24□□□□□ -0.61
LIN54-203ENST00000446851 MYOGP15173 224 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 EPHB4P54760 987 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 SRGAP1Q7Z6B7 1085 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 ACAP3Q96P50 834 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 CBWD1Q9BRT8 395 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 IL23AQ9NPF7 189 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 TRIP12Q14669 1992 aaPredicted RBP11.23□□□□□ -0.61
LIN54-203ENST00000446851 ADGRA3Q8IWK6 1321 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 STAG3L1P0CL83 205 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 USP8P40818 1118 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 SNW1Q13573 536 aaKnown RBP11.23□□□□□ -0.61
LIN54-203ENST00000446851 PSRC1Q6PGN9 363 aaPredicted RBP11.23□□□□□ -0.61
LIN54-203ENST00000446851 KIF12Q96FN5 646 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 MSRAQ9UJ68 235 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 MBLAC1A4D2B0 266 aaPredicted RBP11.23□□□□□ -0.61
LIN54-203ENST00000446851 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 TMEM191BP0C7N4 346 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 SCNN1GP51170 649 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 LRMPQ12912 555 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 ANKRD20A12PQ8NF67 263 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 MAGEF1Q9HAY2 307 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 TOPORSQ9NS56 1045 aaPredicted RBP11.23□□□□□ -0.61
LIN54-203ENST00000446851 FAM105AQ9NUU6 356 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 MAN1B1Q9UKM7 699 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 MGAMO43451 1857 aa11.23□□□□□ -0.61
LIN54-203ENST00000446851 CETN3O15182 167 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 TPM2P07951 284 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 ARL2P36404 184 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 ALDH7A1P49419 539 aaKnown RBP11.22□□□□□ -0.61
LIN54-203ENST00000446851 TPM4P67936 248 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 MBTPS1Q14703 1052 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 ZNF720Q7Z2F6 126 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 URGCPQ8TCY9 931 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 ELMO3Q96BJ8 720 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 MMS19Q96T76 1030 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 NAT10Q9H0A0 1025 aaKnown RBP11.22□□□□□ -0.61
LIN54-203ENST00000446851 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 IFT122Q9HBG6 1241 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 ACKR2O00590 384 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 CXCL8P10145 99 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 MUTP22033 750 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 PRCPP42785 496 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 NOLC1Q14978 699 aaKnown RBP eCLIP11.22□□□□□ -0.61
LIN54-203ENST00000446851 E2F4Q16254 413 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 ANO6Q4KMQ2 910 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 DRC7Q8IY82 874 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 SRRTQ9BXP5 876 aaKnown RBP11.22□□□□□ -0.61
LIN54-203ENST00000446851 ANO10Q9NW15 660 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 KCND2Q9NZV8 630 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 DACH1Q9UI36 760 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 A0A0C4DFX4 3053 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 STBD1O95210 358 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 RPL13P26373 211 aaKnown RBP11.22□□□□□ -0.61
LIN54-203ENST00000446851 TRPC3Q13507 836 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 DPCR1Q3MIW9 517 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 FAM109BQ6ICB4 259 aaPredicted RBP11.22□□□□□ -0.61
LIN54-203ENST00000446851 SLC24A5Q71RS6 500 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 TMEM161BQ8NDZ6 487 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 TMEM206Q9H813 350 aa11.22□□□□□ -0.61
LIN54-203ENST00000446851 COLQQ9Y215 455 aaPredicted RBP11.22□□□□□ -0.61
LIN54-203ENST00000446851 ANKRD63C9JTQ0 380 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 CALUO43852 315 aaPredicted RBP11.21□□□□□ -0.61
LIN54-203ENST00000446851 CD4P01730 458 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 HOXD8P13378 290 aaPredicted RBP11.21□□□□□ -0.61
LIN54-203ENST00000446851 GUCY2FP51841 1108 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 SLC27A1Q6PCB7 646 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 DNAJC19Q96DA6 116 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 PGBD4Q96DM1 585 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 C7orf25Q9BPX7 421 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 TCHHQ07283 1943 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 RECQL4O94761 1208 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 B3GAT3O94766 335 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 GSDMAQ96QA5 445 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 NXF1Q9UBU9 619 aaKnown RBP11.21□□□□□ -0.61
LIN54-203ENST00000446851 HPSEQ9Y251 543 aa11.21□□□□□ -0.61
LIN54-203ENST00000446851 TSPAN1O60635 241 aa11.21□□□□□ -0.62
LIN54-203ENST00000446851 GPR32O75388 356 aa11.21□□□□□ -0.62
LIN54-203ENST00000446851 SERPINC1P01008 464 aa11.21□□□□□ -0.62
LIN54-203ENST00000446851 CTNNB1P35222 781 aa11.21□□□□□ -0.62
LIN54-203ENST00000446851 ZNF165P49910 485 aa11.21□□□□□ -0.62
LIN54-203ENST00000446851 PAK1Q13153 545 aa11.21□□□□□ -0.62
LIN54-203ENST00000446851 CCDC85BQ15834 202 aaPredicted RBP11.21□□□□□ -0.62
LIN54-203ENST00000446851 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.62
LIN54-203ENST00000446851 PPP2R2DQ66LE6 453 aa11.21□□□□□ -0.62
LIN54-203ENST00000446851 CNKSR3Q6P9H4 555 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms