RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SAMSN1Q9NSI8 373 aaKnown RBP8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 TBX21Q9UL17 535 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 PPME1Q9Y570 386 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 PCDHB13Q9Y5F0 798 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 SIP14410 1827 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 MROH7Q68CQ1 1323 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 ASAP2O43150 1006 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 UPP2O95045 317 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 LETM1O95202 739 aaPredicted RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 NR3C1P04150 777 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 MYL1P05976 194 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 WNT7BP56706 349 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 GTF2BQ00403 316 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 PSMD2Q13200 908 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 STIM1Q13586 685 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 KNOP1Q1ED39 458 aaKnown RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 SCARA3Q6AZY7 606 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 TWF2Q6IBS0 349 aaKnown RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 OTOP2Q7RTS6 562 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 ZNF410Q86VK4 478 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 MAP4K3Q8IVH8 894 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 DHX40Q8IX18 779 aaKnown RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 ELOA2Q8IYF1 753 aaPredicted RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 NME8Q8N427 588 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 KCTD17Q8N5Z5 321 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 CCDC155Q8N6L0 562 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 DBF4BQ8NFT6 615 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 ZNF507Q8TCN5 953 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 LINC01599Q8WXQ3 324 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 RABGGTAQ92696 567 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 ACO2Q99798 780 aaKnown RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 MSTO1Q9BUK6 570 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 STRA6Q9BX79 667 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 SRRTQ9BXP5 876 aaKnown RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 MRPL4Q9BYD3 311 aaKnown RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 C2orf40Q9H1Z8 148 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 CDT1Q9H211 546 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 KCTD10Q9H3F6 313 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 FZD8Q9H461 694 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 NXF3Q9H4D5 531 aaKnown RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 ERVK-5Q9HDB9 667 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 TOPORSQ9NS56 1045 aaPredicted RBP8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 CACNG4Q9UBN1 327 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 SEL1LQ9UBV2 794 aa8.27□□□□□ -1.09
SF3A3P1-201ENST00000446317 ZBBXA8MT70 800 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 ACKR2O00590 384 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 PSMA7O14818 248 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 ADRB2P07550 413 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 SFPQP23246 707 aaKnown RBP eCLIP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 NR2F2P24468 414 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 CCNE1P24864 410 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 ADSSP30520 456 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 HOXA11P31270 313 aaPredicted RBP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 ZNF165P49910 485 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 PDE4CQ08493 712 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 GLRA4Q5JXX5 417 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 UBXN11Q5T124 520 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 TSHZ1Q6ZSZ6 1077 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 STXBP4Q6ZWJ1 553 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 SRGAP1Q7Z6B7 1085 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 RTN4RL1Q86UN2 441 aaPredicted RBP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 CBWD2Q8IUF1 395 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 GPIHBP1Q8IV16 184 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 GUF1Q8N442 669 aaKnown RBP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 CSGALNACT2Q8N6G5 542 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 MLKLQ8NB16 471 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 POP1Q99575 1024 aaKnown RBP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 TSG101Q99816 390 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 ADAM2Q99965 735 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 GBP3Q9H0R5 595 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 PRMT7Q9NVM4 692 aaPredicted RBP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 FANCLQ9NW38 375 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 SNTG2Q9NY99 539 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 HSPBP1Q9NZL4 362 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 PRKAG2Q9UGJ0 569 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 PARP2Q9UGN5 583 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 INPP5FQ9Y2H2 1132 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 ALPK3Q96L96 1907 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 CNTNAP2Q9UHC6 1331 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 SCN5AQ14524 2016 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 PES1O00541 588 aaKnown RBP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 EIF3DO15371 548 aaKnown RBP eCLIP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 CALUO43852 315 aaPredicted RBP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 EXOC3O60645 756 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 CLSTN1O94985 981 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 CSPG5O95196 566 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 TIMP1P01033 207 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 TRIM49P0CI25 452 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 TRIM49CP0CI26 452 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 CXCL8P10145 99 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 FGFR1P11362 822 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 ATP1A3P13637 1013 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 AFF1P51825 1210 aaKnown RBP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 GUCY2FP51841 1108 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 EFNA5P52803 228 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 ZNF445P59923 1031 aa8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 PAN2Q504Q3 1202 aaKnown RBP8.26□□□□□ -1.09
SF3A3P1-201ENST00000446317 DCAF17Q5H9S7 520 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms