RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TSHZ1Q6ZSZ6 1077 aa8.36□□□□□ -1.07
SMG1-202ENST00000446231 COILP38432 576 aaPredicted RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 TRADDQ15628 312 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 MEI1Q5TIA1 1274 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 LRRC74BQ6ZQY2 392 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 LRRC6Q86X45 466 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 BRIP1Q9BX63 1249 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 SEPT10Q9P0V9 454 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG1-202ENST00000446231 IL10P22301 178 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 KCNG1Q9UIX4 513 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 ERBB3P21860 1342 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 EIF4G3O43432 1585 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 PPIP5K2O43314 1243 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 CPA2P48052 419 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 COPAP53621 1224 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 ITGA8P53708 1063 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 POLGP54098 1239 aaPredicted RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 HDAC4P56524 1084 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 KBTBD12Q3ZCT8 623 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 MDH1BQ5I0G3 518 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 TMEM139Q8IV31 216 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 TAGLN3Q9UI15 199 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 MEIS1O00470 390 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 GSTA4O15217 222 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 CLIC2O15247 247 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 SLC16A3O15427 465 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 COPB2P35606 906 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 KIF22Q14807 665 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 ARMC3Q5W041 872 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 SFR1Q86XK3 245 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 REREQ9P2R6 1566 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 WDR62O43379 1518 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 PP2D1A8MPX8 630 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 RASSF9O75901 435 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 IGKV5-2P06315 115 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 SP100P23497 879 aaPredicted RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 DYNLT1P63172 113 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 CNBD2Q96M20 576 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 MARCOQ9UEW3 520 aaPredicted RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 GARSP41250 739 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 CYP4A11Q02928 519 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 MMADHCQ9H3L0 296 aaPredicted RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 K7ENM7 598 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 DNM1LO00429 736 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 CHRNA2Q15822 529 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 HIF1AQ16665 826 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 TBCKQ8TEA7 893 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 CDKL2Q92772 493 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 ACCSQ96QU6 501 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 URB2Q14146 1524 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 A8MXQ7 604 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 CLDN3O15551 220 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.35□□□□□ -1.073e-6■■■■■ 65
SMG1-202ENST00000446231 GALNT15Q8N3T1 639 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 INTS2Q9H0H0 1204 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 UPF3AQ9H1J1 476 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 CCDC159P0C7I6 412 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 DNAJC3Q13217 504 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 GLYCTKQ8IVS8 523 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 ZCRB1Q8TBF4 217 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 NT5C1BQ96P26 610 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 MRPL47Q9HD33 250 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 MRC2Q9UBG0 1479 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 NCALDP61601 193 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 SDR42E1Q8WUS8 393 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 SENP2Q9HC62 589 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 ZNF608Q9ULD9 1512 aaPredicted RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 HSPA13P48723 471 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 CNOT8Q9UFF9 292 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 STRIP2Q9ULQ0 834 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 MGRN1O60291 552 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 OTUD4Q01804 1114 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 KNOP1Q1ED39 458 aaKnown RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 SLC45A4Q5BKX6 768 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 FAM102BQ5T8I3 360 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 C16orf89Q6UX73 402 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 ZBTB38Q8NAP3 1195 aaPredicted RBP8.35□□□□□ -1.07
SMG1-202ENST00000446231 STX3Q13277 289 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 SEMA4AQ9H3S1 761 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 PHTF1Q9UMS5 762 aa8.35□□□□□ -1.07
SMG1-202ENST00000446231 FRMPD2Q68DX3 1309 aaPredicted RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 VIL1P09327 827 aaKnown RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 KRT3P12035 628 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 USP4Q13107 963 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 PPM1KQ8N3J5 372 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 FAM81BQ96LP2 452 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 WDR46O15213 610 aaKnown RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 ENTPD5O75356 428 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 RGS2P41220 211 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 YWHAEP62258 255 aaKnown RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 TXNRD1Q16881 649 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 BAG5Q9UL15 447 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 TRPM2O94759 1503 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 HIBADHP31937 336 aaKnown RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 DMP1Q13316 513 aaPredicted RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 RCOR2Q8IZ40 523 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 MRPL1Q9BYD6 325 aaKnown RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 PSMC3IPQ9P2W1 217 aaPredicted RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 AIM2O14862 343 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms