RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 LGALS2P05162 132 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 DRD2P14416 443 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 CYP7A1P22680 504 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 WEE1P30291 646 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 RNASELQ05823 741 aaKnown RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 FHL5Q5TD97 284 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 DHX40Q8IX18 779 aaKnown RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 ABI1Q8IZP0 508 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 HDAC11Q96DB2 347 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 TRAIPQ9BWF2 469 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 CELF4Q9BZC1 486 aaKnown RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 NFE2L3Q9Y4A8 694 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 ITPR3Q14573 2671 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 E9PSI1 815 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 SOD2P04179 222 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 NBPF7P0C2Y1 421 aaPredicted RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 SKIP12755 728 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 IBSPP21815 317 aaPredicted RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 SRSF11Q05519 484 aaKnown RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 SLC36A4Q6YBV0 504 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 TIPARPQ7Z3E1 657 aaKnown RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 ADGRA1Q86SQ6 560 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 TSPYL6Q8N831 410 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 PPP1R13LQ8WUF5 828 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 LMBR1Q8WVP7 490 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 MIB2Q96AX9 1013 aa7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 FAM124BQ9H5Z6 455 aaPredicted RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 MAP3K20Q9NYL2 800 aaKnown RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 MBD1Q9UIS9 605 aaPredicted RBP7.48□□□□□ -1.21
BRAFP1-201ENST00000445336 URODP06132 367 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 PSMC3P17980 439 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 RASA1P20936 1047 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 FCARP24071 287 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 MAPK8P45983 427 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 GHRHRQ02643 423 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 SCRN1Q12765 414 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 FAM102BQ5T8I3 360 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 BTNL9Q6UXG8 535 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 RNF207Q6ZRF8 634 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 CXXC5Q7LFL8 322 aaKnown RBP7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 ZNF564Q8TBZ8 553 aaPredicted RBP7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 SPACA7Q96KW9 195 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 KXD1Q9BQD3 176 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 GPR88Q9GZN0 384 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 ZNF263O14978 683 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 CDK8P49336 464 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 SUZ12Q15022 739 aaKnown RBP7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 C2orf27AQ580R0 203 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 LYSMD4Q5XG99 296 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 NSMFQ6X4W1 530 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 NSUN6Q8TEA1 469 aaKnown RBP7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 TSC1Q92574 1164 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 PIGKQ92643 395 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 LGMNQ99538 433 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 ARID3AQ99856 593 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 RIOK1Q9BRS2 568 aaKnown RBP7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 ZFP14Q9HCL3 533 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 ANK1P16157 1881 aa7.47□□□□□ -1.21
BRAFP1-201ENST00000445336 A0A1W2PQD8 194 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 DENND3A2RUS2 1198 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 CHMP4BP1P59074 171 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 PLCB2Q00722 1185 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 NFX1Q12986 1120 aaKnown RBP7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 LINC00303Q3SY05 128 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 GORABQ5T7V8 394 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 KANSL1Q7Z3B3 1105 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 LEMD2Q8NC56 503 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 ZNF287Q9HBT7 754 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 GEMIN8Q9NWZ8 242 aaKnown RBP7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 FBXW11Q9UKB1 542 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 CCPG1Q9ULG6 757 aa7.46□□□□□ -1.21
BRAFP1-201ENST00000445336 ARHGEF17Q96PE2 2063 aaPredicted RBP7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 DMXL2Q8TDJ6 3036 aa7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 SMIM35A0A1B0GVV1 85 aa7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 HNRNPRO43390 633 aaKnown RBP7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 LZTS3O60299 673 aaPredicted RBP7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 DYNLL1P63167 89 aaKnown RBP7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 SKOR1P84550 965 aa7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 LY6KQ17RY6 165 aa7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 HSF5Q4G112 596 aaPredicted RBP7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 MFSD6LQ8IWD5 586 aa7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 MCM9Q9NXL9 1143 aa7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 PCDHA2Q9Y5H9 948 aa7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 NUP210Q8TEM1 1887 aaPredicted RBP7.46□□□□□ -1.22
BRAFP1-201ENST00000445336 PATE3B3GLJ2 98 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 STAM2O75886 525 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 CD1EP15812 388 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 DSG1Q02413 1049 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 NCAPHQ15003 741 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 PTPRNQ16849 979 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 CLEC4DQ8WXI8 215 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 HOMER2Q9NSB8 354 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 ZNF197O14709 1029 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 CER1O95813 267 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 FAM200AQ8TCP9 573 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 SPATA33Q96N06 139 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 ASXL3Q9C0F0 2248 aa7.45□□□□□ -1.22
BRAFP1-201ENST00000445336 AHCTF1Q8WYP5 2266 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 NOTCH4Q99466 2003 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 SPECC1L-ADORA2AF8WAN1 911 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms