RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PTENP60484 403 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 MGAT3Q09327 533 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 SMYD4Q8IYR2 804 aaPredicted RBP18.93■□□□□ 0.62
LIME1-202ENST00000444951 TMEM40Q8WWA1 233 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 RAD9AQ99638 391 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 MINDY3Q9H8M7 445 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 IFT122Q9HBG6 1241 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 GDAQ9Y2T3 454 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 RHOBTB3O94955 611 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 DARSP14868 501 aaKnown RBP18.92■□□□□ 0.62
LIME1-202ENST00000444951 SARSP49591 514 aaKnown RBP18.92■□□□□ 0.62
LIME1-202ENST00000444951 NCKAP1LP55160 1127 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 STK4Q13043 487 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 KCNB1Q14721 858 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 PLEKHG4Q58EX7 1191 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 L1TD1Q5T7N2 865 aaKnown RBP18.92■□□□□ 0.62
LIME1-202ENST00000444951 TMEM161BQ8NDZ6 487 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 GZF1Q9H116 711 aaPredicted RBP18.92■□□□□ 0.62
LIME1-202ENST00000444951 C2orf40Q9H1Z8 148 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 TSPYL2Q9H2G4 693 aaPredicted RBP18.92■□□□□ 0.62
LIME1-202ENST00000444951 OLFML3Q9NRN5 406 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 KCNG1Q9UIX4 513 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 MAPK8IP1Q9UQF2 711 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 USP20Q9Y2K6 914 aa18.92■□□□□ 0.62
LIME1-202ENST00000444951 NOC2LQ9Y3T9 749 aaKnown RBP18.92■□□□□ 0.62
LIME1-202ENST00000444951 K7ERI5 159 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 PRPF6O94906 941 aaKnown RBP18.91■□□□□ 0.62
LIME1-202ENST00000444951 MAPTP10636 758 aaKnown RBP18.91■□□□□ 0.62
LIME1-202ENST00000444951 EIF4BP23588 611 aaKnown RBP18.91■□□□□ 0.62
LIME1-202ENST00000444951 ERVK-21P61565 698 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 EHHADHQ08426 723 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 PSMD2Q13200 908 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 TMEM132AQ24JP5 1023 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 FAM26DQ5JW98 314 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 FBXO47Q5MNV8 452 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 CDCA2Q69YH5 1023 aaPredicted RBP18.91■□□□□ 0.62
LIME1-202ENST00000444951 CATSPER4Q7RTX7 472 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 ZNF720Q7Z2F6 126 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 SRGAP1Q7Z6B7 1085 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 SPATA20Q8TB22 786 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 FIZ1Q96SL8 496 aa18.91■□□□□ 0.62
LIME1-202ENST00000444951 NTPCRQ9BSD7 190 aaKnown RBP18.91■□□□□ 0.62
LIME1-202ENST00000444951 H0YCG3 227 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 EFCAB14O75071 495 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 RPS6KA5O75582 802 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 PRKCBP05771 671 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 CD52P31358 61 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 EFNA5P52803 228 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 MBTD1Q05BQ5 628 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 POU5F1BQ06416 359 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 NFX1Q12986 1120 aaKnown RBP18.9■□□□□ 0.62
LIME1-202ENST00000444951 STRN3Q13033 797 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 LPIN1Q14693 890 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 NT5DC1Q5TFE4 455 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 NELFCDQ8IXH7 590 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 MYOCDQ8IZQ8 938 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 ZNF710Q8N1W2 664 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 KIAA0895Q8NCT3 520 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 TGS1Q96RS0 853 aaKnown RBP18.9■□□□□ 0.62
LIME1-202ENST00000444951 C17orf80Q9BSJ5 609 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 ARHGAP28Q9P2N2 729 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 PCDHB13Q9Y5F0 798 aa18.9■□□□□ 0.62
LIME1-202ENST00000444951 SYCE3A1L190 88 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 ERLIN2O94905 339 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 SFPQP23246 707 aaKnown RBP eCLIP18.89■□□□□ 0.61
LIME1-202ENST00000444951 KCNA1Q09470 495 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 PAK2Q13177 524 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 MORC3Q14149 939 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 MAPK6Q16659 721 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 ZNF658Q5TYW1 1059 aaPredicted RBP18.89■□□□□ 0.61
LIME1-202ENST00000444951 SASS6Q6UVJ0 657 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 STXBP4Q6ZWJ1 553 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 TAS1R3Q7RTX0 852 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 FAM228AQ86W67 206 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 BICD1Q96G01 975 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 CCDC113Q9H0I3 377 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 IKZF4Q9H2S9 585 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 AGO3Q9H9G7 860 aaKnown RBP18.89■□□□□ 0.61
LIME1-202ENST00000444951 TBX20Q9UMR3 447 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 PHLPP2Q6ZVD8 1323 aa18.89■□□□□ 0.61
LIME1-202ENST00000444951 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.88■□□□□ 0.61
LIME1-202ENST00000444951 B4GALT5O43286 388 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 BMP6P22004 513 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 HTRA4P83105 476 aaPredicted RBP18.88■□□□□ 0.61
LIME1-202ENST00000444951 GTF2BQ00403 316 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 PRPF4BQ13523 1007 aaKnown RBP18.88■□□□□ 0.61
LIME1-202ENST00000444951 ZSCAN23Q3MJ62 389 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 RBM43Q6ZSC3 357 aaKnown RBP18.88■□□□□ 0.61
LIME1-202ENST00000444951 TSHZ1Q6ZSZ6 1077 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 IFNLR1Q8IU57 520 aaPredicted RBP18.88■□□□□ 0.61
LIME1-202ENST00000444951 SYCP3Q8IZU3 236 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 CPB2Q96IY4 423 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 ACCSQ96QU6 501 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 NFKBIZQ9BYH8 718 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 TMEM134Q9H6X4 195 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 PRMT7Q9NVM4 692 aaPredicted RBP18.88■□□□□ 0.61
LIME1-202ENST00000444951 RAPGEFL1Q9UHV5 662 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 ST3GAL5Q9UNP4 418 aa18.88■□□□□ 0.61
LIME1-202ENST00000444951 TTLL13PA6NNM8 815 aa18.87■□□□□ 0.61
LIME1-202ENST00000444951 AMHP03971 560 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms