RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 IER5Q5VY09 327 aa17■□□□□ 0.31
SNX13-204ENST00000444712 CCDC62Q6P9F0 684 aa17■□□□□ 0.31
SNX13-204ENST00000444712 GJB7Q6PEY0 223 aa17■□□□□ 0.31
SNX13-204ENST00000444712 C2orf69Q8N8R5 385 aa17■□□□□ 0.31
SNX13-204ENST00000444712 TMEM143Q96AN5 459 aa17■□□□□ 0.31
SNX13-204ENST00000444712 SAAL1Q96ER3 474 aa17■□□□□ 0.31
SNX13-204ENST00000444712 TMEM117Q9H0C3 514 aa17■□□□□ 0.31
SNX13-204ENST00000444712 MORF4L1Q9UBU8 362 aa17■□□□□ 0.31
SNX13-204ENST00000444712 PUF60Q9UHX1 559 aaKnown RBP17■□□□□ 0.31
SNX13-204ENST00000444712 COQ4Q9Y3A0 265 aa17■□□□□ 0.31
SNX13-204ENST00000444712 ARIH2O95376 493 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 ZBTB48P10074 688 aaPredicted RBP16.99■□□□□ 0.31
SNX13-204ENST00000444712 CYP2C8P10632 490 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 EFNA5P52803 228 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 FBXO38Q6PIJ6 1188 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 TAS1R3Q7RTX0 852 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 ZNF467Q7Z7K2 595 aaPredicted RBP16.99■□□□□ 0.31
SNX13-204ENST00000444712 ASAP3Q8TDY4 903 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 ATP8B4Q8TF62 1192 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 MS4A4AQ96JQ5 239 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 SPATA33Q96N06 139 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 SMARCAD1Q9H4L7 1026 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 VTA1Q9NP79 307 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 SNX12Q9UMY4 172 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 DIS3Q9Y2L1 958 aaKnown RBP16.99■□□□□ 0.31
SNX13-204ENST00000444712 HYOU1Q9Y4L1 999 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 IVNS1ABPQ9Y6Y0 642 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 TXNP10599 105 aaKnown RBP16.99■□□□□ 0.31
SNX13-204ENST00000444712 MXD4Q14582 209 aaPredicted RBP16.99■□□□□ 0.31
SNX13-204ENST00000444712 KIF22Q14807 665 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 PHLDB3Q6NSJ2 640 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 FBXO16Q8IX29 292 aaPredicted RBP16.99■□□□□ 0.31
SNX13-204ENST00000444712 PLEKHO2Q8TD55 490 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 EFCC1Q9HA90 598 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 UBE2TQ9NPD8 197 aaPredicted RBP16.99■□□□□ 0.31
SNX13-204ENST00000444712 NENFQ9UMX5 172 aa16.99■□□□□ 0.31
SNX13-204ENST00000444712 A0A0A6YYK5 440 aaPredicted RBP16.98■□□□□ 0.31
SNX13-204ENST00000444712 LRRIQ3A6PVS8 624 aaPredicted RBP16.98■□□□□ 0.31
SNX13-204ENST00000444712 BTBD19C9JJ37 291 aa16.98■□□□□ 0.31
SNX13-204ENST00000444712 ZC3H11AO75152 810 aaKnown RBP eCLIP16.98■□□□□ 0.31
SNX13-204ENST00000444712 H2AFZP0C0S5 128 aa16.98■□□□□ 0.31
SNX13-204ENST00000444712 GPC3P51654 580 aa16.98■□□□□ 0.31
SNX13-204ENST00000444712 H2AFVQ71UI9 128 aa16.98■□□□□ 0.31
SNX13-204ENST00000444712 ARMCX2Q7L311 632 aa16.98■□□□□ 0.31
SNX13-204ENST00000444712 FBXL13Q8NEE6 735 aa16.98■□□□□ 0.31
SNX13-204ENST00000444712 PARK7Q99497 189 aaKnown RBP16.98■□□□□ 0.31
SNX13-204ENST00000444712 GPR88Q9GZN0 384 aa16.98■□□□□ 0.31
SNX13-204ENST00000444712 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
SNX13-204ENST00000444712 PCDHGC5Q9Y5F6 944 aa16.98■□□□□ 0.31
SNX13-204ENST00000444712 ZNF236Q9UL36 1845 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 ADCY3O60266 1144 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 KLRC1P26715 233 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 MFAP3P55082 362 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 ARHGAP44Q17R89 818 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 ZNF792Q3KQV3 632 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 HSDL1Q3SXM5 330 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 CAGE1Q8TC20 777 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 C2orf40Q9H1Z8 148 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 HDAC6Q9UBN7 1215 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 RNF14Q9UBS8 474 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 HBP1O60381 514 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 LAMC2Q13753 1193 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 PSMD6Q15008 389 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 ZPBP2Q6X784 338 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 ENOSF1Q7L5Y1 443 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 ZBTB8OSQ8IWT0 167 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 ANKRD13CQ8N6S4 541 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 ZSWIM2Q8NEG5 633 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 LMBR1Q8WVP7 490 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 PSPC1Q8WXF1 523 aaKnown RBP16.97■□□□□ 0.31
SNX13-204ENST00000444712 CCDC127Q96BQ5 260 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 NT5C1BQ96P26 610 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 AGO2Q9UKV8 859 aaKnown RBP16.97■□□□□ 0.31
SNX13-204ENST00000444712 ZSWIM8A7E2V4 1837 aa16.97■□□□□ 0.31
SNX13-204ENST00000444712 BUB1O43683 1085 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 TNFAIP3P21580 790 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 ADORA2AP29274 412 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 MAP2K1Q02750 393 aaPredicted RBP16.96■□□□□ 0.31
SNX13-204ENST00000444712 ITIH3Q06033 890 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 MSANTD4Q8NCY6 345 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 SLC30A5Q8TAD4 765 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 BRI3BPQ8WY22 251 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 CALR3Q96L12 384 aaKnown RBP16.96■□□□□ 0.31
SNX13-204ENST00000444712 FNBP1Q96RU3 617 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 FAM213AQ9BRX8 229 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 CCDC94Q9BW85 323 aaPredicted RBP16.96■□□□□ 0.31
SNX13-204ENST00000444712 SALL4Q9UJQ4 1053 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 TRPM7Q96QT4 1865 aa16.96■□□□□ 0.31
SNX13-204ENST00000444712 DDX3XO00571 662 aaKnown RBP eCLIP16.96■□□□□ 0.33e-18■■■□□ 15.2
SNX13-204ENST00000444712 CLDN10P78369 228 aa16.96■□□□□ 0.3
SNX13-204ENST00000444712 CAPSQ13938 189 aa16.96■□□□□ 0.3
SNX13-204ENST00000444712 PLCB4Q15147 1175 aa16.96■□□□□ 0.3
SNX13-204ENST00000444712 TMCO3Q6UWJ1 677 aa16.96■□□□□ 0.3
SNX13-204ENST00000444712 U2AF1L4Q8WU68 220 aaKnown RBP16.96■□□□□ 0.3
SNX13-204ENST00000444712 SYT11Q9BT88 431 aa16.96■□□□□ 0.3
SNX13-204ENST00000444712 RAB20Q9NX57 234 aa16.96■□□□□ 0.3
SNX13-204ENST00000444712 IGKV6-21A0A0C4DH24 114 aa16.95■□□□□ 0.3
SNX13-204ENST00000444712 RBM47A0AV96 593 aaKnown RBP16.95■□□□□ 0.3
SNX13-204ENST00000444712 FOXN3O00409 490 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms