RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 LLGL2Q6P1M3 1020 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 NOTUMQ6P988 496 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 SYCE2Q6PIF2 218 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 TMC7Q7Z402 723 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 ADHFE1Q8IWW8 467 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 VPS52Q8N1B4 723 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 GSTCDQ8NEC7 633 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 SNX29Q8TEQ0 813 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 PGBD4Q96DM1 585 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 GAD1Q99259 594 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 APOL5Q9BWW9 433 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 CCDC113Q9H0I3 377 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 BHMT2Q9H2M3 363 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 FZD8Q9H461 694 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 DDX19AQ9NUU7 478 aaKnown RBP12.05□□□□□ -0.48
SF3A1-203ENST00000444440 MARCH5Q9NX47 278 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 CACNG4Q9UBN1 327 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 KIAA1024Q9UPX6 916 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 USP15Q9Y4E8 981 aaPredicted RBP12.05□□□□□ -0.48
SF3A1-203ENST00000444440 A0A1B0GUA9 196 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 NRP1O14786 923 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 INPPL1O15357 1258 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 CLASP2O75122 1294 aaKnown RBP12.04□□□□□ -0.48
SF3A1-203ENST00000444440 ITGA4P13612 1032 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 AKAP5P24588 427 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
SF3A1-203ENST00000444440 SCNN1GP51170 649 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 ATP2C1P98194 919 aaPredicted RBP12.04□□□□□ -0.48
SF3A1-203ENST00000444440 KRT17Q04695 432 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 RNASELQ05823 741 aaKnown RBP12.04□□□□□ -0.48
SF3A1-203ENST00000444440 PDIA5Q14554 519 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 SMC1AQ14683 1233 aaKnown RBP12.04□□□□□ -0.48
SF3A1-203ENST00000444440 EEF1DP3Q658K8 133 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 HAUS3Q68CZ6 603 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 PDE12Q6L8Q7 609 aaKnown RBP12.04□□□□□ -0.48
SF3A1-203ENST00000444440 KANK3Q6NY19 840 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 PPP4R3CPQ6ZMV5 832 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 DAW1Q8N136 415 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 MRPL43Q8N983 215 aaKnown RBP12.04□□□□□ -0.48
SF3A1-203ENST00000444440 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 LRRC15Q8TF66 581 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 PPP2R3CQ969Q6 453 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 TMEM169Q96HH4 297 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 PNMA5Q96PV4 448 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 RUSC1Q9BVN2 902 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 S1PR5Q9H228 398 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 KLK14Q9P0G3 267 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 PUF60Q9UHX1 559 aaKnown RBP12.04□□□□□ -0.48
SF3A1-203ENST00000444440 CNTNAP2Q9UHC6 1331 aa12.04□□□□□ -0.48
SF3A1-203ENST00000444440 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 CXCL14O95715 111 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 EFEMP2O95967 443 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 CTSAP10619 480 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 MUTP22033 750 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 PRPHP41219 470 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 GRIN1Q05586 938 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 DSC1Q08554 894 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 MAPK7Q13164 816 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 CUL4AQ13619 759 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 PCBP1Q15365 356 aaKnown RBP eCLIP12.03□□□□□ -0.483e-6■□□□□ 8.8
SF3A1-203ENST00000444440 FAM187BQ17R55 369 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 ANKRD54Q6NXT1 300 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 SLC27A1Q6PCB7 646 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 TMEM184AQ6ZMB5 413 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 TAS1R1Q7RTX1 841 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 DDX53Q86TM3 631 aaKnown RBP12.03□□□□□ -0.48
SF3A1-203ENST00000444440 COLGALT2Q8IYK4 626 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 URGCPQ8TCY9 931 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 SUSD6Q92537 303 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 RABGGTAQ92696 567 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 CCDC51Q96ER9 411 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 CDCA3Q99618 268 aaPredicted RBP12.03□□□□□ -0.48
SF3A1-203ENST00000444440 BACH2Q9BYV9 841 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 NGRNQ9NPE2 291 aaKnown RBP12.03□□□□□ -0.48
SF3A1-203ENST00000444440 PRKAG3Q9UGI9 489 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 SMC3Q9UQE7 1217 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 HCFC2Q9Y5Z7 792 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 NOTCH4Q99466 2003 aa12.03□□□□□ -0.48
SF3A1-203ENST00000444440 ZNF318Q5VUA4 2279 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.02□□□□□ -0.49
SF3A1-203ENST00000444440 H3BQV1 296 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 SSBP05455 408 aaKnown RBP eCLIP12.02□□□□□ -0.49
SF3A1-203ENST00000444440 PRKCBP05771 671 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 EPCAMP16422 314 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 LIG1P18858 919 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 COL9A1P20849 921 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 CA8P35219 290 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 NAMPTP43490 491 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 PTPN14Q15678 1187 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 RILPL1Q5EBL4 403 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 NT5DC1Q5TFE4 455 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 DTHD1Q6ZMT9 781 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 TAS1R3Q7RTX0 852 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 PLIN2Q99541 437 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 PAAF1Q9BRP4 392 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 LRFN3Q9BTN0 628 aa12.02□□□□□ -0.49
SF3A1-203ENST00000444440 PRMT7Q9NVM4 692 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 237.5 ms