RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 PHF7Q9BWX1 381 aaPredicted RBP15.52■□□□□ 0.08
TREX1-202ENST00000444177 BHMT2Q9H2M3 363 aa15.52■□□□□ 0.08
TREX1-202ENST00000444177 MUTYHQ9UIF7 546 aa15.52■□□□□ 0.08
TREX1-202ENST00000444177 HCN4Q9Y3Q4 1203 aa15.52■□□□□ 0.08
TREX1-202ENST00000444177 ARIH1Q9Y4X5 557 aaPredicted RBP15.52■□□□□ 0.08
TREX1-202ENST00000444177 CARNS1A5YM72 827 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 LRRIQ4A6NIV6 560 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 INO80B-WBP1J3KQ70 363 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 CLASP2O75122 1294 aaKnown RBP15.51■□□□□ 0.07
TREX1-202ENST00000444177 CDC25AP30304 524 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 AFF1P51825 1210 aaKnown RBP15.51■□□□□ 0.07
TREX1-202ENST00000444177 PTENP60484 403 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 POU5F1BQ06416 359 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 BMS1Q14692 1282 aaKnown RBP15.51■□□□□ 0.07
TREX1-202ENST00000444177 CBX2Q14781 532 aaPredicted RBP15.51■□□□□ 0.07
TREX1-202ENST00000444177 DDX53Q86TM3 631 aaKnown RBP15.51■□□□□ 0.07
TREX1-202ENST00000444177 VPS52Q8N1B4 723 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 IGSF21Q96ID5 467 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 GBP3Q9H0R5 595 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 DNAJB4Q9UDY4 337 aa15.51■□□□□ 0.07
TREX1-202ENST00000444177 PIEZO1Q92508 2521 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 B4GALT3O60512 393 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 DDHD2O94830 711 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 BMP15O95972 392 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 HOXB8P17481 243 aaPredicted RBP15.5■□□□□ 0.07
TREX1-202ENST00000444177 NCLP19338 710 aaKnown RBP15.5■□□□□ 0.07
TREX1-202ENST00000444177 SLC11A1P49279 550 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 RESTQ13127 1097 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 PCBP1Q15365 356 aaKnown RBP eCLIP15.5■□□□□ 0.07
TREX1-202ENST00000444177 ARL6IP4Q66PJ3 421 aaKnown RBP15.5■□□□□ 0.07
TREX1-202ENST00000444177 IFNLR1Q8IU57 520 aaPredicted RBP15.5■□□□□ 0.07
TREX1-202ENST00000444177 URGCPQ8TCY9 931 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 BCL7CQ8WUZ0 217 aaPredicted RBP15.5■□□□□ 0.07
TREX1-202ENST00000444177 CASP10Q92851 521 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 FAM122AQ96E09 287 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 RPGRIP1Q96KN7 1286 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 APOL5Q9BWW9 433 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 RSAD1Q9HA92 442 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 KANSL3Q9P2N6 904 aa15.5■□□□□ 0.07
TREX1-202ENST00000444177 CNTNAP2Q9UHC6 1331 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 E9PMD0 336 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 TSPAN1O60635 241 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 ALDH2P05091 517 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 HSP90AA1P07900 732 aaKnown RBP15.49■□□□□ 0.07
TREX1-202ENST00000444177 ITGA4P13612 1032 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 CYP11B2P19099 503 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 AXLP30530 894 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 CA8P35219 290 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 PLA2G5P39877 138 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 MBTD1Q05BQ5 628 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 NCBP1Q09161 790 aaKnown RBP15.49■□□□□ 0.07
TREX1-202ENST00000444177 SF3A1Q15459 793 aaKnown RBP15.49■□□□□ 0.07
TREX1-202ENST00000444177 SMG8Q8ND04 991 aaKnown RBP15.49■□□□□ 0.07
TREX1-202ENST00000444177 CNNM3Q8NE01 707 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 AUTS2Q8WXX7 1259 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 CDK5RAP3Q96JB5 506 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 MMTAG2Q9BU76 263 aaKnown RBP15.49■□□□□ 0.07
TREX1-202ENST00000444177 ZBP1Q9H171 429 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 DNM3Q9UQ16 869 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 HCFC2Q9Y5Z7 792 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 IRAK3Q9Y616 596 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 TECTAO75443 2155 aa15.49■□□□□ 0.07
TREX1-202ENST00000444177 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.48■□□□□ 0.07
TREX1-202ENST00000444177 POMCP01189 267 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 CTSAP10619 480 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 AMHR2Q16671 573 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 NOTUMQ6P988 496 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 ZBTB8OSQ8IWT0 167 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 TMEM87AQ8NBN3 555 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 BSNDQ8WZ55 320 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 EDAQ92838 391 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 CCDC51Q96ER9 411 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 CPB2Q96IY4 423 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 FAM193BQ96PV7 902 aaPredicted RBP15.48■□□□□ 0.07
TREX1-202ENST00000444177 PLIN2Q99541 437 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 VN1R3Q9BXE9 311 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 EIF2AQ9BY44 585 aaKnown RBP15.48■□□□□ 0.07
TREX1-202ENST00000444177 NFKBIZQ9BYH8 718 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 CSRNP2Q9H175 543 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 UBN1Q9NPG3 1134 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 MTMR6Q9Y217 621 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 FAN1Q9Y2M0 1017 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 IPPQ9Y573 584 aa15.48■□□□□ 0.07
TREX1-202ENST00000444177 ZDBF2Q9HCK1 2354 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 B4GALT5O43286 388 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 STX6O43752 255 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 SSBP05455 408 aaKnown RBP eCLIP15.47■□□□□ 0.07
TREX1-202ENST00000444177 GIT2Q14161 759 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 TPRNQ4KMQ1 711 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 FAM173BQ6P4H8 233 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 KCNK18Q7Z418 384 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 CABP7Q86V35 215 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 RASSF8Q8NHQ8 419 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 DEPTORQ8TB45 409 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 AK8Q96MA6 479 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 PNMA5Q96PV4 448 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 TMEM175Q9BSA9 504 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 NT5C3AQ9H0P0 336 aa15.47■□□□□ 0.07
TREX1-202ENST00000444177 C2orf40Q9H1Z8 148 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms