RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 TRIM49P0CI25 452 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 TRIM49CP0CI26 452 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 PTENP60484 403 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 CXCL17Q6UXB2 119 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 ZPBP2Q6X784 338 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 CBWD2Q8IUF1 395 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 ZSWIM2Q8NEG5 633 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 FAM213AQ9BRX8 229 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 MTG1Q9BT17 334 aaPredicted RBP10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 TCHPQ9BT92 498 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 CCDC113Q9H0I3 377 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 FAM49AQ9H0Q0 323 aaPredicted RBP10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 SIK3Q9Y2K2 1263 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 LUC7L2Q9Y383 392 aaKnown RBP10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 A0A087WZ62 844 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 MAPK13O15264 365 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 CLDN3O15551 220 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 GNAT1P11488 350 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 KRT9P35527 623 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 VAMP7P51809 220 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 PRMT2P55345 433 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 CCZ1BP86790 482 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 CCZ1P86791 482 aaPredicted RBP10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 PRPF4BQ13523 1007 aaKnown RBP10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 HSP90AA2PQ14568 343 aaPredicted RBP10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 MAP3K21Q5TCX8 1036 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 USP37Q86T82 979 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 KIAA0319LQ8IZA0 1049 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 GPD1LQ8N335 351 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 SLAIN1Q8ND83 568 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 ZNF397Q8NF99 534 aaPredicted RBP10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 NEK11Q8NG66 645 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 IQCDQ96DY2 449 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 CCDC51Q96ER9 411 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 PANX2Q96RD6 677 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 BAG1Q99933 345 aaPredicted RBP10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 FDXACB1Q9BRP7 624 aaPredicted RBP10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 MSTO1Q9BUK6 570 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 NFKBIZQ9BYH8 718 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 AGO2Q9UKV8 859 aaKnown RBP10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 PYCARDQ9ULZ3 195 aa10.35□□□□□ -0.75
SMPD4P1-203ENST00000443839 C17orf102A2RUQ5 167 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 MBLAC1A4D2B0 266 aaPredicted RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 ACKR2O00590 384 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 KIAA0391O15091 583 aaKnown RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 ADAMTS4O75173 837 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 TOM1L1O75674 476 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 INHAP05111 366 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 EDN1P05305 212 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 ADRB2P07550 413 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 CYP2C9P11712 490 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 HARSP12081 509 aaKnown RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 NLRP11P59045 1033 aaKnown RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 MBTD1Q05BQ5 628 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 POU5F1BQ06416 359 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 EXOC3L4Q17RC7 722 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 TSR1Q2NL82 804 aaKnown RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 FIGNQ5HY92 759 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 CCDC127Q96BQ5 260 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 FBXL18Q96ME1 805 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 LSM14BQ9BX40 385 aaKnown RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 MINDY3Q9H8M7 445 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 IFT122Q9HBG6 1241 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 KIAA1586Q9HCI6 787 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 GCNT4Q9P109 453 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 HDAC6Q9UBN7 1215 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 DDX20Q9UHI6 824 aaKnown RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 CAPN11Q9UMQ6 739 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 GINS2Q9Y248 185 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 TRIM17Q9Y577 477 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 STYXL1Q9Y6J8 313 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 TRIP12Q14669 1992 aaPredicted RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 A0A0B4J269 797 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 SMIM35A0A1B0GVV1 85 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 ZNF233A6NK53 670 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 TTLL13PA6NNM8 815 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 RNF225M0QZC1 329 aaPredicted RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 EXTL3O43909 919 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 FMO5P49326 533 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 GPC3P51654 580 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 DLG4P78352 724 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 MYL7Q01449 175 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 TMEM62Q0P6H9 643 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 KCNMA1Q12791 1236 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 KIZQ2M2Z5 673 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 GBP6Q6ZN66 633 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 CACNA2D4Q7Z3S7 1137 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 ZNF410Q86VK4 478 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 ZBTB45Q96K62 511 aaPredicted RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 TTYH3Q9C0H2 523 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 FZD8Q9H461 694 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 ABHD10Q9NUJ1 306 aa10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 PRMT7Q9NVM4 692 aaPredicted RBP10.34□□□□□ -0.75
SMPD4P1-203ENST00000443839 SCN10AQ9Y5Y9 1956 aa10.33□□□□□ -0.76
SMPD4P1-203ENST00000443839 A0A1W2PQJ5 194 aa10.33□□□□□ -0.76
SMPD4P1-203ENST00000443839 GTPBP10A4D1E9 387 aaKnown RBP10.33□□□□□ -0.76
SMPD4P1-203ENST00000443839 EPHB6O15197 1021 aa10.33□□□□□ -0.76
SMPD4P1-203ENST00000443839 TREHO43280 583 aa10.33□□□□□ -0.76
SMPD4P1-203ENST00000443839 B4GALT5O43286 388 aa10.33□□□□□ -0.76
SMPD4P1-203ENST00000443839 CSDE1O75534 798 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms