RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ITGB7P26010 798 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 BLMHQ13867 455 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 FGL2Q14314 439 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 PLS1Q14651 629 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 CCDC96Q2M329 555 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 THEMIS2Q5TEJ8 643 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 KLHDC7AQ5VTJ3 777 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 RHOT1Q8IXI2 618 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 STK11IPQ8N1F8 1099 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 ANKS4BQ8N8V4 417 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 ZNF527Q8NB42 609 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 OR10H5Q8NGA6 315 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 DMRTA2Q96SC8 542 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 FDXACB1Q9BRP7 624 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 NOL10Q9BSC4 688 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 TTLL2Q9BWV7 592 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 SLAMF8Q9P0V8 285 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 ADAMTS3O15072 1205 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 DYRK3O43781 588 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 RHOBTB3O94955 611 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 RPL17P18621 184 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 TNFAIP3P21580 790 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 PDIA3P30101 505 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 TECP42680 631 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 FMO1Q01740 532 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 PPFIA1Q13136 1202 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 PRR16Q569H4 304 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 CIAPIN1Q6FI81 312 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 GGT6Q6P531 493 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 SESTD1Q86VW0 696 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 SYTL1Q8IYJ3 562 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 SH2D3CQ8N5H7 860 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 TMEM41AQ96HV5 264 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 TBATAQ96M53 351 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 C7orf25Q9BPX7 421 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 INO80BQ9C086 356 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 ZNF287Q9HBT7 754 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 PNPLA8Q9NP80 782 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 RBM12Q9NTZ6 932 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 RBPJLQ9UBG7 517 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 TMEM59LQ9UK28 342 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 OGDHLQ9ULD0 1010 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 PCDHA3Q9Y5H8 950 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 A0A1W2PPL8 197 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 MYO1FO00160 1098 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 IL18RAPO95256 599 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 H2AFB1P0C5Y9 115 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 H2AFB2P0C5Z0 115 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 GPR15P49685 360 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 CYP4F8P98187 520 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 GALNT1Q10472 559 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 IKZF1Q13422 519 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 DAG1Q14118 895 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 STARD3Q14849 445 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 PPP4R3AQ6IN85 833 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 CELF5Q8N6W0 485 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 CALML6Q8TD86 181 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 BRI3BPQ8WY22 251 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 SAMD11Q96NU1 681 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 ALPK1Q96QP1 1244 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 VRK1Q99986 396 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 UNKQ9C0B0 810 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 INCENPQ9NQS7 918 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 LMBRD1Q9NUN5 540 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 CPNE7Q9UBL6 633 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 FTSJ1Q9UET6 329 aa4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 LRRFIP2Q9Y608 721 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-207ENST00000441725 A0A0A6YYJ9 748 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 APOL1O14791 398 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 PSPNO60542 156 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 CSTBP04080 98 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 PYGLP06737 847 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 PARP1P09874 1014 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 HARSP12081 509 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 BRAFP15056 766 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 VEGFAP15692 232 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 SLC7A1P30825 629 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 HSPA7P48741 367 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 PRKCQQ04759 706 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 DDX10Q13206 875 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 CNGA2Q16280 664 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 CPSF6Q16630 551 aaKnown RBP eCLIP4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 MPEG1Q2M385 716 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 PGBD2Q6P3X8 592 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 MZT2AQ6P582 158 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 PDZD4Q76G19 769 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 TMC6Q7Z403 805 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 HEATR3Q7Z4Q2 680 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 MAATS1Q7Z4T9 603 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 C3orf20Q8ND61 904 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 MTFMTQ96DP5 389 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 ABCF2Q9UG63 623 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 WASF3Q9UPY6 502 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 SH3BP1Q9Y3L3 701 aa4.84□□□□□ -1.63
CDC42BPA-207ENST00000441725 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.64
CDC42BPA-207ENST00000441725 ZC3H12DA2A288 527 aaKnown RBP4.84□□□□□ -1.64
CDC42BPA-207ENST00000441725 TTC36A6NLP5 189 aa4.84□□□□□ -1.64
CDC42BPA-207ENST00000441725 FOXN3O00409 490 aaPredicted RBP4.84□□□□□ -1.64
CDC42BPA-207ENST00000441725 NCAM2O15394 837 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms