RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 RAD23BP54727 409 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 TCP10Q12799 353 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 ANO7Q6IWH7 933 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 CTTNBP2NLQ9P2B4 639 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 PCYOX1Q9UHG3 505 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 SNED1Q8TER0 1413 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 MAP3K13O43283 966 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 CCNG1P51959 295 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 ART4Q93070 314 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 ASTN1O14525 1302 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 ATP8B3O60423 1300 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 KLHL33A6NCF5 533 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 SPDYE5A6NIY4 337 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 H0Y3Z8 333 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 LRRN2O75325 713 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 SNUPNO95149 360 aaKnown RBP21.77■■□□□ 1.08
SHOX2-203ENST00000441443 HSPA1LP34931 641 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.77■■□□□ 1.08
SHOX2-203ENST00000441443 SYNGAP1Q96PV0 1343 aa21.77■■□□□ 1.08
SHOX2-203ENST00000441443 SFI1A8K8P3 1242 aa21.77■■□□□ 1.07
SHOX2-203ENST00000441443 PPP1R11O60927 126 aaPredicted RBP21.77■■□□□ 1.07
SHOX2-203ENST00000441443 CCNB1P14635 433 aa21.77■■□□□ 1.07
SHOX2-203ENST00000441443 ADRA2BP18089 450 aa21.77■■□□□ 1.07
SHOX2-203ENST00000441443 CPNE8Q86YQ8 564 aa21.77■■□□□ 1.07
SHOX2-203ENST00000441443 SLF2Q8IX21 1173 aa21.77■■□□□ 1.07
SHOX2-203ENST00000441443 PDXKO00764 312 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 GCNT3O95395 438 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 GNAZP19086 355 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 BRD2P25440 801 aaKnown RBP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 CTNNA2P26232 953 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 RRP1BQ14684 758 aaKnown RBP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 RBBP5Q15291 538 aaKnown RBP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 CERS5Q8N5B7 392 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 TAOK3Q9H2K8 898 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 KCNQ5Q9NR82 932 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 BCS1LQ9Y276 419 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 POLRMTO00411 1230 aaKnown RBP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 SMIM24O75264 130 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 PYGMP11217 842 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 TARSP26639 723 aaKnown RBP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 GBP1P32455 592 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 RBM5P52756 815 aaKnown RBP eCLIP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 MESDQ14696 234 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 TTBK2Q6IQ55 1244 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 CERKQ8TCT0 537 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 RUNDC3BQ96NL0 473 aa21.76■■□□□ 1.07
SHOX2-203ENST00000441443 ROPN1BQ9BZX4 212 aaPredicted RBP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 ROPN1Q9HAT0 212 aaPredicted RBP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 METTL14Q9HCE5 456 aaKnown RBP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 TRPC5Q9UL62 973 aaPredicted RBP21.76■■□□□ 1.07
SHOX2-203ENST00000441443 GM2AP17900 193 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 KSR1Q8IVT5 923 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 CYP4X1Q8N118 509 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 UBL4BQ8N7F7 174 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 FBF1Q8TES7 1133 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 PAIP2Q9BPZ3 127 aaKnown RBP21.75■■□□□ 1.07
SHOX2-203ENST00000441443 STK33Q9BYT3 514 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 MYLK2Q9H1R3 596 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 DBNDD1Q9H9R9 158 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 ETAA1Q9NY74 926 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 HAO1Q9UJM8 370 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 PECAM1P16284 738 aaPredicted RBP21.75■■□□□ 1.07
SHOX2-203ENST00000441443 SMARCA1P28370 1054 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 CHKAP35790 457 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 COILP38432 576 aaPredicted RBP21.75■■□□□ 1.07
SHOX2-203ENST00000441443 CALCOCO2Q13137 446 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 SLC30A9Q6PML9 568 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 VSIG1Q86XK7 387 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 CATSPER3Q86XQ3 398 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 RAB3IPQ96QF0 476 aaPredicted RBP21.75■■□□□ 1.07
SHOX2-203ENST00000441443 TSC22D3Q99576 134 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 RNPEPL1Q9HAU8 725 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 AAASQ9NRG9 546 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 PCDHAC2Q9Y5I4 1007 aa21.75■■□□□ 1.07
SHOX2-203ENST00000441443 ANKRD62A6NC57 917 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 KCTD1Q719H9 257 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 EPM2AIP1Q7L775 607 aaPredicted RBP21.74■■□□□ 1.07
SHOX2-203ENST00000441443 SLC20A1Q8WUM9 679 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 PLCD4Q9BRC7 762 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 SYT11Q9BT88 431 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 GPR88Q9GZN0 384 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 TYW1Q9NV66 732 aaKnown RBP21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L15C9J2P7 530 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L13C9JLJ4 530 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L11C9JVI0 530 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L18D6R9N7 530 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L22D6RA61 530 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L17D6RBQ6 530 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L19D6RCP7 530 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L20D6RJB6 530 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 PEX11AO75192 247 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 GNAT1P11488 350 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 NEFHP12036 1026 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 COMTP21964 271 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 CALB2P22676 271 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 RPL13P26373 211 aaKnown RBP21.74■■□□□ 1.07
SHOX2-203ENST00000441443 MXRA7P84157 204 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L24Q0WX57 530 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 KYNUQ16719 465 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 USP17L6PQ6QN14 398 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms