RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 RSPH10BP0C881 870 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 HPGDP15428 266 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-206ENST00000441438 ARHGDIBP52566 201 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 TFAP4Q01664 338 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 STRN3Q13033 797 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 FRG1Q14331 258 aaKnown RBP11.37□□□□□ -0.59
SYNE2-206ENST00000441438 MXD4Q14582 209 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-206ENST00000441438 NAA30Q147X3 362 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-206ENST00000441438 LETM2Q2VYF4 491 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 FAM26DQ5JW98 314 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 SASS6Q6UVJ0 657 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 B3GNT6Q6ZMB0 384 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 GAS2L3Q86XJ1 694 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 ANKRD52Q8NB46 1076 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 NCLNQ969V3 563 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 HS6ST2Q96MM7 605 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 TARS2Q9BW92 718 aaKnown RBP11.37□□□□□ -0.59
SYNE2-206ENST00000441438 CABP1Q9NZU7 370 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 FAM153AQ9UHL3 310 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 ZNF510Q9Y2H8 683 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 ZFP37Q9Y6Q3 630 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-206ENST00000441438 OVOS2A0A0G2JMS6 1433 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 PAPPAQ13219 1627 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 SMPD2O60906 423 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 EXOSC9Q06265 439 aaKnown RBP11.37□□□□□ -0.59
SYNE2-206ENST00000441438 NFE2L1Q14494 772 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 MAPKAPK3Q16644 382 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 CNNM4Q6P4Q7 775 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 ACAT2Q9BWD1 397 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 RGL1Q9NZL6 768 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 TBC1D14Q9P2M4 693 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 PHF24Q9UPV7 400 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 LRRC37A3O60309 1634 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 TXNL1O43396 289 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 CLTBP09497 229 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 USP14P54578 494 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 PLA2G4EQ3MJ16 856 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 CCDC14Q49A88 953 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 DCAF17Q5H9S7 520 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-206ENST00000441438 NECAB2Q7Z6G3 386 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 ARL5BQ96KC2 179 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 AAASQ9NRG9 546 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 PCDHB8Q9UN66 801 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 C15orf41Q9Y2V0 281 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 RTCBQ9Y3I0 505 aaKnown RBP11.37□□□□□ -0.59
SYNE2-206ENST00000441438 SESN1Q9Y6P5 492 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 WDR19Q8NEZ3 1342 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 A0A1W2PP64 1363 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 CLRN2A0PK11 232 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 SMAD7O15105 426 aaKnown RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 ASAP2O43150 1006 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 SLC22A3O75751 556 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 HEXBP07686 556 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 TUBP50607 506 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 SMAD1Q15797 465 aaKnown RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 BNIPLQ7Z465 357 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 FAM169BQ8N8A8 192 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 KCNH5Q8NCM2 988 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 TTLL2Q9BWV7 592 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 CHTOPQ9Y3Y2 248 aaKnown RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 AP1M2Q9Y6Q5 423 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 TNS1Q9HBL0 1735 aaKnown RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 RGS12O14924 1447 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 IKBKBO14920 756 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 DKK1O94907 266 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 REC8O95072 547 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 KCNH1O95259 989 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 CLCN6P51797 869 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 RPUSD3Q6P087 351 aaKnown RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 CLEC2AQ6UVW9 174 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 KRT28Q7Z3Y7 464 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 C10orf67Q8IYJ2 551 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 CDC26Q8NHZ8 85 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 DDX17Q92841 729 aaKnown RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 TTC17Q96AE7 1141 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 SPATA17Q96L03 361 aa11.36□□□□□ -0.59
SYNE2-206ENST00000441438 DDX50Q9BQ39 737 aaKnown RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 WDR12Q9GZL7 423 aaKnown RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 NPDC1Q9NQX5 325 aaPredicted RBP11.36□□□□□ -0.59
SYNE2-206ENST00000441438 ALDH1A2O94788 518 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 ASGR2P07307 311 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 PF4V1P10720 104 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 GDI1P31150 447 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 IGSF11Q5DX21 431 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 GPR139Q6DWJ6 353 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 MEX3BQ6ZN04 569 aaKnown RBP11.35□□□□□ -0.59
SYNE2-206ENST00000441438 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 LSMEM2Q8N112 164 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 CCDC150Q8NCX0 1101 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 ACAP3Q96P50 834 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 CDK19Q9BWU1 502 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 TXLNGYQ9BZA5 131 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 C2orf40Q9H1Z8 148 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 CDHR5Q9HBB8 845 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 CHORDC1Q9UHD1 332 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms