RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 AP3B2Q13367 1082 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 DCAF4Q8WV16 495 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 KAT5Q92993 513 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 ARHGEF26Q96DR7 871 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.32□□□□□ -0.282e-7■■□□□ 12.4
PCGF3-207ENST00000440452 EDEM3Q9BZQ6 932 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 GLT8D2Q9H1C3 349 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 PNMA3Q9UL41 463 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
PCGF3-207ENST00000440452 USP20Q9Y2K6 914 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 FOXN3O00409 490 aaPredicted RBP13.32□□□□□ -0.28
PCGF3-207ENST00000440452 MGRN1O60291 552 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 NPR1P16066 1061 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
PCGF3-207ENST00000440452 KCNJ1P48048 391 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 FMO5P49326 533 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 PAPOLAP51003 745 aaKnown RBP13.32□□□□□ -0.28
PCGF3-207ENST00000440452 TMEM154Q6P9G4 183 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 CAPN12Q6ZSI9 719 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 MIER3Q7Z3K6 550 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 CCDC105Q8IYK2 499 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 FAM118BQ9BPY3 351 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 ADAM33Q9BZ11 813 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 ATXN2Q99700 1313 aaKnown RBP13.32□□□□□ -0.28
PCGF3-207ENST00000440452 TESPA1A2RU30 521 aaPredicted RBP13.32□□□□□ -0.28
PCGF3-207ENST00000440452 CFAP73A6NFT4 308 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 H0YIN7 160 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 FERP16591 822 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 MSH2P43246 934 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 PDE6CP51160 858 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 UAP1Q16222 522 aaPredicted RBP13.32□□□□□ -0.28
PCGF3-207ENST00000440452 FAM102BQ5T8I3 360 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 C3orf20Q8ND61 904 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 NAF1Q96HR8 494 aaKnown RBP13.32□□□□□ -0.28
PCGF3-207ENST00000440452 WDR18Q9BV38 432 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 GLIS2Q9BZE0 524 aaPredicted RBP13.32□□□□□ -0.28
PCGF3-207ENST00000440452 FAM129AQ9BZQ8 928 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 HOMER3Q9NSC5 361 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 PCDHGC5Q9Y5F6 944 aa13.32□□□□□ -0.28
PCGF3-207ENST00000440452 EMSYQ7Z589 1322 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 IGKV6D-41A0A0C4DH26 115 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 RASGRF2O14827 1237 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 DNAJC8O75937 253 aaPredicted RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 SLITRK3O94933 977 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 LCA5LO95447 670 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 KRT16P08779 473 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 HARSP12081 509 aaKnown RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 CETN1Q12798 172 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 SLC29A2Q14542 456 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 EPHA7Q15375 998 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 SEPT7Q16181 437 aaKnown RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 GRIPAP1Q4V328 841 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 RFX8Q6ZV50 586 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 TAOK1Q7L7X3 1001 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 OGFOD1Q8N543 542 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 EPS8L3Q8TE67 593 aaKnown RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 AGBL1Q96MI9 1066 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 ZNF570Q96NI8 536 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 INTS2Q9H0H0 1204 aaKnown RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 RAB17Q9H0T7 212 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.31□□□□□ -0.287e-7■■■■□ 26
PCGF3-207ENST00000440452 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 BZW2Q9Y6E2 419 aaKnown RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 IGSF9BQ9UPX0 1349 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 TGFB1I1O43294 461 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 EYA4O95677 639 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 FTLP02792 175 aaPredicted RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 CCND1P24385 295 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 SOX5P35711 763 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 PEX3P56589 373 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 LAMB3Q13751 1172 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 RRP1BQ14684 758 aaKnown RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 LMBRD2Q68DH5 695 aaPredicted RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 LRIG3Q6UXM1 1119 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 STXBP4Q6ZWJ1 553 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 ZC3H18Q86VM9 953 aaKnown RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 ZSWIM2Q8NEG5 633 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 SLC30A5Q8TAD4 765 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 P3H4Q92791 437 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 NUDCD1Q96RS6 583 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 POP1Q99575 1024 aaKnown RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 NKIRAS1Q9NYS0 192 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 STRCQ7RTU9 1775 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 IPO5O00410 1097 aaKnown RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 SLC16A4O15374 487 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 PMS2P54278 862 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 DR1Q01658 176 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 LRRC23Q53EV4 343 aaPredicted RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 SIAH1Q8IUQ4 282 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 LNX1Q8TBB1 728 aaPredicted RBP13.31□□□□□ -0.28
PCGF3-207ENST00000440452 RUBCNQ92622 972 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 BICD1Q96G01 975 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 FAM20AQ96MK3 541 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 CBWD1Q9BRT8 395 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 VCXQ9H320 206 aa13.31□□□□□ -0.28
PCGF3-207ENST00000440452 DNAJC5Q9H3Z4 198 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms