RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 AP5M1Q9H0R1 490 aa12.32□□□□□ -0.44
CCBE1-202ENST00000439986 UBE2TQ9NPD8 197 aaPredicted RBP12.32□□□□□ -0.44
CCBE1-202ENST00000439986 TLK1Q9UKI8 766 aa12.32□□□□□ -0.44
CCBE1-202ENST00000439986 WDR17Q8IZU2 1322 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 CFLARO15519 480 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 WBP4O75554 376 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 SRGAP2CP0DJJ0 459 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 NCF2P19878 526 aaPredicted RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 CRKLP46109 303 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 TXNRD1Q16881 649 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 DCAF15Q66K64 600 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 ELAC2Q9BQ52 826 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 CALN1Q9BXU9 219 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 PACSIN2Q9UNF0 486 aaPredicted RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 RAD17O75943 681 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 PTGS2P35354 604 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 FAM83BQ5T0W9 1011 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 PHLDB3Q6NSJ2 640 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 SLC44A2Q8IWA5 706 aaPredicted RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 SAMD3Q8N6K7 520 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 SIKE1Q9BRV8 207 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 CYP2D6P10635 497 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 GCFC2P16383 781 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 RHBDL3P58872 404 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 MAGOHP61326 146 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 RBM20Q5T481 1227 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 KIAA2013Q8IYS2 634 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 PIP4K2CQ8TBX8 421 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 PLA2G4BP0C869 781 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 ZNF18P17022 549 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 OSBPP22059 807 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 HOXA13P31271 388 aaPredicted RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 NCAPHQ15003 741 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 MAP3K21Q5TCX8 1036 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 NUDCD3Q8IVD9 361 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 TUBA1CQ9BQE3 449 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 ADGRB2O60241 1585 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 GOLGA8TH3BQL2 631 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 ECEL1O95672 775 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 CCND2P30279 289 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 YWHAHQ04917 246 aaPredicted RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 TMEM259Q4ZIN3 620 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 SGO2Q562F6 1265 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 OR6B2Q6IFH4 312 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 HEXIM2Q96MH2 286 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 DDX47Q9H0S4 455 aaKnown RBP12.31□□□□□ -0.44
CCBE1-202ENST00000439986 POLD4Q9HCU8 107 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 AGPAT5Q9NUQ2 364 aa12.31□□□□□ -0.44
CCBE1-202ENST00000439986 POTEMA6NI47 508 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 EIF3HO15372 352 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCBE1-202ENST00000439986 KBTBD12Q3ZCT8 623 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 SPOPLQ6IQ16 392 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 ARHGEF18Q6ZSZ5 1173 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 NT5C1BQ96P26 610 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 PRKAG2Q9UGJ0 569 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
CCBE1-202ENST00000439986 ABT1Q9ULW3 272 aaKnown RBP12.3□□□□□ -0.44
CCBE1-202ENST00000439986 UTYO14607 1347 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 GNB5O14775 395 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 SRGAP2BP0DMP2 458 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 STX1BP61266 288 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 ERFEQ4G0M1 354 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 SUSD4Q5VX71 490 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 ISCA1Q9BUE6 129 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 ATP6V1HQ9UI12 483 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 AP3B1O00203 1094 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 PSMD14O00487 310 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 PPP1R37O75864 691 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 FCER1AP12319 257 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 HSPA6P17066 643 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 PTPAQ15257 358 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 RSBN1LQ6PCB5 846 aaPredicted RBP12.3□□□□□ -0.44
CCBE1-202ENST00000439986 PIGBQ92521 554 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 POLR3CQ9BUI4 534 aaPredicted RBP12.3□□□□□ -0.44
CCBE1-202ENST00000439986 CPVLQ9H3G5 476 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 MEFVO15553 781 aaPredicted RBP12.3□□□□□ -0.44
CCBE1-202ENST00000439986 PLS3P13797 630 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 ADSSL1Q8N142 457 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 SNX24Q9Y343 169 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 SH3D21A4FU49 640 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 GRXCR2A6NFK2 248 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 TPPPO94811 219 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 FBXW4P57775 412 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 NUGGCQ68CJ6 796 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 ANKRD40Q6AI12 368 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 KRT27Q7Z3Y8 459 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 CEP170P1Q96L14 293 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 TAF1DQ9H5J8 278 aaPredicted RBP12.3□□□□□ -0.44
CCBE1-202ENST00000439986 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
CCBE1-202ENST00000439986 PCDHGA3Q9Y5H0 932 aa12.3□□□□□ -0.44
CCBE1-202ENST00000439986 LOC102724428A0A0B4J2F2 783 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 hCG_1984214I3L0E3 225 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms