RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 TTLL13PA6NNM8 815 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 ACKR2O00590 384 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 N4BP3O15049 544 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 POMCP01189 267 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 GUCY2CP25092 1073 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 MLH1P40692 756 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 NPTX2P47972 431 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 AFF1P51825 1210 aaKnown RBP26.49■■□□□ 1.83
CPNE1-217ENST00000439669 SLC12A3P55017 1021 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 MAPK7Q13164 816 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 KARSQ15046 597 aaKnown RBP26.49■■□□□ 1.83
CPNE1-217ENST00000439669 FOXD4L5Q5VV16 416 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-217ENST00000439669 ADGRD2Q7Z7M1 963 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 SPRYD3Q8NCJ5 442 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 FOXD4L4Q8WXT5 416 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-217ENST00000439669 FAM193BQ96PV7 902 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-217ENST00000439669 GAD1Q99259 594 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 PDZD7Q9H5P4 517 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 USP20Q9Y2K6 914 aa26.49■■□□□ 1.83
CPNE1-217ENST00000439669 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-217ENST00000439669 NCK2O43639 380 aa26.48■■□□□ 1.83
CPNE1-217ENST00000439669 PLCG1P19174 1290 aa26.48■■□□□ 1.83
CPNE1-217ENST00000439669 GTF2F1P35269 517 aaKnown RBP eCLIP26.48■■□□□ 1.836e-10■■■□□ 14.7
CPNE1-217ENST00000439669 ERVFC1P60507 584 aa26.48■■□□□ 1.83
CPNE1-217ENST00000439669 SPECC1Q5M775 1068 aa26.48■■□□□ 1.83
CPNE1-217ENST00000439669 TMEM169Q96HH4 297 aa26.48■■□□□ 1.83
CPNE1-217ENST00000439669 ADPGKQ9BRR6 497 aa26.48■■□□□ 1.83
CPNE1-217ENST00000439669 KMT5AQ9NQR1 393 aa26.48■■□□□ 1.83
CPNE1-217ENST00000439669 ENTPD7Q9NQZ7 604 aa26.48■■□□□ 1.83
CPNE1-217ENST00000439669 FBXO2Q9UK22 296 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-217ENST00000439669 PHLPP2Q6ZVD8 1323 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 BRWD1Q9NSI6 2320 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 CARNS1A5YM72 827 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 SFI1A8K8P3 1242 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 K7ERI5 159 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 EDN1P05305 212 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 AKAP5P24588 427 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 DHX8Q14562 1220 aaKnown RBP26.47■■□□□ 1.83
CPNE1-217ENST00000439669 PLPP4Q5VZY2 271 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 PDE12Q6L8Q7 609 aaKnown RBP26.47■■□□□ 1.83
CPNE1-217ENST00000439669 RBM23Q86U06 439 aaKnown RBP26.47■■□□□ 1.83
CPNE1-217ENST00000439669 ZNF280BQ86YH2 543 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 ADAMTS19Q8TE59 1207 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 TCF25Q9BQ70 676 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 C17orf75Q9HAS0 396 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 KCND2Q9NZV8 630 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 DNAJB4Q9UDY4 337 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 PARP2Q9UGN5 583 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 GIT1Q9Y2X7 761 aa26.47■■□□□ 1.83
CPNE1-217ENST00000439669 SRPRBQ9Y5M8 271 aaKnown RBP26.47■■□□□ 1.83
CPNE1-217ENST00000439669 ARL5CA6NH57 179 aa26.46■■□□□ 1.83
CPNE1-217ENST00000439669 H3BQ06 376 aaPredicted RBP26.46■■□□□ 1.83
CPNE1-217ENST00000439669 GALTP07902 379 aa26.46■■□□□ 1.83
CPNE1-217ENST00000439669 NRIP1P48552 1158 aa26.46■■□□□ 1.83
CPNE1-217ENST00000439669 SLC11A1P49279 550 aa26.46■■□□□ 1.83
CPNE1-217ENST00000439669 COL19A1Q14993 1142 aa26.46■■□□□ 1.83
CPNE1-217ENST00000439669 GPBP1Q86WP2 473 aa26.46■■□□□ 1.83
CPNE1-217ENST00000439669 ZFP42Q96MM3 310 aa26.46■■□□□ 1.83
CPNE1-217ENST00000439669 CCSER1Q9C0I3 900 aa26.46■■□□□ 1.83
CPNE1-217ENST00000439669 NPHP3-ACAD11A0A0J9YXS1 232 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 FSCN2O14926 492 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 B4GALT3O60512 393 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 DDHD2O94830 711 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 BMP1P13497 986 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 SCNN1GP51170 649 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 CACNB1Q02641 598 aaPredicted RBP26.45■■□□□ 1.82
CPNE1-217ENST00000439669 LEXMQ3ZCV2 418 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 EEF1DP3Q658K8 133 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 TMEM173Q86WV6 379 aaPredicted RBP26.45■■□□□ 1.82
CPNE1-217ENST00000439669 LRRC15Q8TF66 581 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 RAD54LQ92698 747 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 EPSTI1Q96J88 318 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 CLIC6Q96NY7 704 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 TLE6Q9H808 572 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 BLOC1S4Q9NUP1 217 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 KLK14Q9P0G3 267 aa26.45■■□□□ 1.82
CPNE1-217ENST00000439669 REV3LO60673 3130 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 SLC16A4O15374 487 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 PDIA4P13667 645 aaKnown RBP26.44■■□□□ 1.82
CPNE1-217ENST00000439669 PLS3P13797 630 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 TXLNAP40222 546 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 MCM6Q14566 821 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 SLC39A14Q15043 492 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 STK38Q15208 465 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 NT5DC1Q5TFE4 455 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 ATF7IP2Q5U623 682 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 USP49Q70CQ1 688 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 TMC7Q7Z402 723 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 IGSF21Q96ID5 467 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 ZNF396Q96N95 335 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-217ENST00000439669 RPS6KC1Q96S38 1066 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 TMEM175Q9BSA9 504 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 TMEM134Q9H6X4 195 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 ARHGAP28Q9P2N2 729 aa26.44■■□□□ 1.82
CPNE1-217ENST00000439669 RBM19Q9Y4C8 960 aaKnown RBP26.44■■□□□ 1.82
CPNE1-217ENST00000439669 PER2O15055 1255 aa26.43■■□□□ 1.82
CPNE1-217ENST00000439669 INPPL1O15357 1258 aa26.43■■□□□ 1.82
CPNE1-217ENST00000439669 LINC01565O15544 149 aa26.43■■□□□ 1.82
CPNE1-217ENST00000439669 KRT18P05783 430 aaKnown RBP26.43■■□□□ 1.82
CPNE1-217ENST00000439669 CA8P35219 290 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms