RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 PPP1R7Q15435 360 aa16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 CNGA2Q16280 664 aa16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 ZNF568Q3ZCX4 644 aa16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 TLDC1Q6P9B6 456 aa16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 CCDC137Q6PK04 289 aaKnown RBP16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 FBXO11Q86XK2 927 aa16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 SLC9A9Q8IVB4 645 aa16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 ART4Q93070 314 aa16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 NSRP1Q9H0G5 558 aaKnown RBP16.43■□□□□ 0.22
CDC42EP4-202ENST00000439510 IGLV3-22A0A075B6J6 115 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 SMIM23A6NLE4 172 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 MTA2O94776 668 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 SLITRK3O94933 977 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 OAS1P00973 400 aaKnown RBP16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 BFSP1Q12934 665 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 AUHQ13825 339 aaKnown RBP16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 DOK7Q18PE1 504 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 CCDC63Q8NA47 563 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 SLC20A1Q8WUM9 679 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 RUNDC3BQ96NL0 473 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 ELAC2Q9BQ52 826 aaKnown RBP16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 COA1Q9GZY4 146 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 VEZTQ9HBM0 779 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 CTTNBP2NLQ9P2B4 639 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 RASGRF2O14827 1237 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 RAD21O60216 631 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 FTLP02792 175 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 SLURP2P0DP57 97 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 CYP2J2P51589 502 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 STXBP4Q6ZWJ1 553 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 CYFIP1Q7L576 1253 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 TAOK1Q7L7X3 1001 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 KSR1Q8IVT5 923 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 MORC4Q8TE76 937 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 CD101Q93033 1021 aa16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 ROPN1BQ9BZX4 212 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 ROPN1Q9HAT0 212 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP4-202ENST00000439510 BCRP11274 1271 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 FGFR4P22455 802 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 KCNA4P22459 653 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 GPC5P78333 572 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 ILDR2Q71H61 639 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 OTOP1Q7RTM1 612 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 SIAH1Q8IUQ4 282 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 VTI1AQ96AJ9 217 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 WNT8AQ9H1J5 351 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 SNX3O60493 162 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 LRRN2O75325 713 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 VIMP08670 466 aaKnown RBP16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 PDE6CP51160 858 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 E2F5Q15329 346 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 USH1GQ495M9 461 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 SEL1L2Q5TEA6 688 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 APOBEC3HQ6NTF7 200 aaKnown RBP16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 FAM178BQ8IXR5 827 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 TMX4Q9H1E5 349 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
CDC42EP4-202ENST00000439510 COMTP21964 271 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 SNAP25P60880 206 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 NFIAQ12857 509 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 MYBPC2Q14324 1141 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 SHROOM1Q2M3G4 852 aaPredicted RBP16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 HHIPL2Q6UWX4 724 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 C12orf50Q8NA57 414 aaPredicted RBP16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 STRA6Q9BX79 667 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 KCND2Q9NZV8 630 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 PIK3CDO00329 1044 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 COILP38432 576 aaPredicted RBP16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 PPP2R5CQ13362 524 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 SIX1Q15475 284 aaPredicted RBP16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 TPH2Q8IWU9 490 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 DYDC2Q96IM9 177 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 ANKRD63C9JTQ0 380 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 PSMD10O75832 226 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 MUTP22033 750 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 ZNF76P36508 570 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 SLCO1A2P46721 670 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 ZNF268Q14587 947 aaPredicted RBP16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 TRMT10CQ7L0Y3 403 aaKnown RBP16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 EXOC3L1Q86VI1 746 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 ZFPM1Q8IX07 1006 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 GMCL1Q96IK5 515 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 ABCF3Q9NUQ8 709 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 SUFUQ9UMX1 484 aa16.4■□□□□ 0.22
CDC42EP4-202ENST00000439510 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 RTN2O75298 545 aa16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 PYGMP11217 842 aa16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 HOXA13P31271 388 aaPredicted RBP16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 SYDE2Q5VT97 1194 aa16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 SLC13A5Q86YT5 568 aaPredicted RBP16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 DBNDD1Q9H9R9 158 aa16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 EBF2Q9HAK2 575 aa16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 HOMER3Q9NSC5 361 aa16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 BAIAP2L1Q9UHR4 511 aa16.39■□□□□ 0.21
CDC42EP4-202ENST00000439510 MTUS1Q9ULD2 1270 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms