RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 A0A1W2PQJ5 194 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 TCRBV7S2A1N4TA0A589 114 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 TMEM120BA0PK00 339 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 FOSP01100 380 aaPredicted RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 TMED2Q15363 201 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 KYNUQ16719 465 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 LRRC36Q1X8D7 754 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 DACT2Q5SW24 774 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 STRIP1Q5VSL9 837 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 PADI6Q6TGC4 694 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 HOOK3Q86VS8 718 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 KRT35Q92764 455 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 HAUS1Q96CS2 278 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 ZDHHC15Q96MV8 337 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 CYTH2Q99418 400 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 DDX50Q9BQ39 737 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 WDR18Q9BV38 432 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.66□□□□□ -0.74e-6■□□□□ 9
CDC42SE1-202ENST00000439374 NYAP2Q9P242 653 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 NAGPAQ9UK23 515 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 GOLGA8SH3BPF8 625 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 GOLGA8MH3BSY2 632 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 NFIBO00712 420 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 HSPA9P38646 679 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 CETN1Q12798 172 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 BYSLQ13895 437 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 EEPD1Q7L9B9 569 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 SPATS2Q86XZ4 545 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 SYT2Q8N9I0 419 aaPredicted RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 SLC35G2Q8TBE7 412 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 FBF1Q8TES7 1133 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 CHURC1Q8WUH1 139 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 JDP2Q8WYK2 163 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 KAT5Q92993 513 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 NAP1L4Q99733 375 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 TEKT3Q9BXF9 490 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 GLT8D2Q9H1C3 349 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 PIDD1Q9HB75 910 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 SLC12A6Q9UHW9 1150 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 ROBO3Q96MS0 1386 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 SNHG28P0DPA3 235 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 CPA2P48052 419 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 OVGP1Q12889 678 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 DNAJC3Q13217 504 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 IFI16Q16666 785 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 CEP55Q53EZ4 464 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 STXBP4Q6ZWJ1 553 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 C4orf33Q8N1A6 199 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 ZSWIM2Q8NEG5 633 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 SLC30A5Q8TAD4 765 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 ARHGEF26Q96DR7 871 aa10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 NUCKS1Q9H1E3 243 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 C12orf65Q9H3J6 166 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 TYW1Q9NV66 732 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-202ENST00000439374 EMSYQ7Z589 1322 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 IGSF9BQ9UPX0 1349 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 CCDC189A1A4V9 331 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 RBAK-RBAKDNI3L0D1 243 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 SLITRK3O94933 977 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 SMARCA1P28370 1054 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 DLG4P78352 724 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 AP3B2Q13367 1082 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 BIRC3Q13489 604 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 MUM1Q2TAK8 710 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 CBWD6Q4V339 395 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 CBWD3Q5JTY5 395 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 CBWD5Q5RIA9 395 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 SLC20A1Q8WUM9 679 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 CCT6BQ92526 530 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 ZNF570Q96NI8 536 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 CBWD1Q9BRT8 395 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 NSRP1Q9H0G5 558 aaKnown RBP10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 THAP2Q9H0W7 228 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 KCTD10Q9H3F6 313 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 UNC45AQ9H3U1 944 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 TSKSQ9UJT2 592 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 C15orf41Q9Y2V0 281 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 ANKRD63C9JTQ0 380 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 FOXN3O00409 490 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 CBX6O95503 412 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 CTCFP49711 727 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 CALCOCO2Q13137 446 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 KAZNQ674X7 775 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 DPH6Q7L8W6 267 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 MSL3Q8N5Y2 521 aaKnown RBP10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 ERP27Q96DN0 273 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 PI4K2AQ9BTU6 479 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 MKNK1Q9BUB5 465 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 KCNMB3Q9NPA1 279 aa10.65□□□□□ -0.7
CDC42SE1-202ENST00000439374 SSU72P8A0A1W2PR75 194 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 EYA4O95677 639 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 BRAFP15056 766 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 RANBP1P43487 201 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 SEPT7Q16181 437 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 FIGNQ5HY92 759 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 SLC27A3Q5K4L6 730 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 CYFIP1Q7L576 1253 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms