RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 GCOM2Q9BZD3 368 aaPredicted RBP11□□□□□ -0.65
SMPD4-208ENST00000439029 PLEKHA4Q9H4M7 779 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 LMAN1LQ9HAT1 526 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 CEP131Q9UPN4 1083 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 SSX2IPQ9Y2D8 614 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 ZFP37Q9Y6Q3 630 aaPredicted RBP11□□□□□ -0.65
SMPD4-208ENST00000439029 FAM86B1E9PN63 330 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 GIPC1O14908 333 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 FAM86B2P0C5J1 330 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 SKIP12755 728 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 SFPQP23246 707 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMPD4-208ENST00000439029 ANTXR2P58335 489 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 DSG1Q02413 1049 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 GRM2Q14416 872 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 STPG1Q5TH74 334 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 LILRA6Q6PI73 481 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 PRSS55Q6UWB4 352 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-208ENST00000439029 CEP68Q76N32 757 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 CATSPER4Q7RTX7 472 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 KSR1Q8IVT5 923 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 KDF1Q8NAX2 398 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-208ENST00000439029 HDAC7Q8WUI4 952 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 PGBD4Q96DM1 585 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 ARRDC1-AS1Q9H2J1 176 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 CHRDQ9H2X0 955 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 RSAD1Q9HA92 442 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 HCFC1R1Q9NWW0 138 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 TCEAL9Q9UHQ7 104 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 MRPS17Q9Y2R5 130 aaKnown RBP10.99□□□□□ -0.65
SMPD4-208ENST00000439029 SAMM50Q9Y512 469 aa10.99□□□□□ -0.65
SMPD4-208ENST00000439029 ZZEF1O43149 2961 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 SPEGQ15772 3267 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 TMEM150BA6NC51 233 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 IPO5O00410 1097 aaKnown RBP10.98□□□□□ -0.65
SMPD4-208ENST00000439029 ZNF862O60290 1169 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 ZNF623O75123 536 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 PSAPP07602 524 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 CXCL12P48061 93 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 RAB27AP51159 221 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 SART3Q15020 963 aaKnown RBP10.98□□□□□ -0.65
SMPD4-208ENST00000439029 UGCGQ16739 394 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 TYW1BQ6NUM6 668 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 RALYLQ86SE5 291 aaKnown RBP10.98□□□□□ -0.65
SMPD4-208ENST00000439029 NPAS3Q8IXF0 933 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 COLGALT2Q8IYK4 626 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 RNF168Q8IYW5 571 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-208ENST00000439029 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 IGDCC4Q8TDY8 1250 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 MCRS1Q96EZ8 462 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 ZNF577Q9BSK1 485 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 TRAIPQ9BWF2 469 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 GPR62Q9BZJ7 368 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 LNPKQ9C0E8 428 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 STK39Q9UEW8 545 aa10.98□□□□□ -0.65
SMPD4-208ENST00000439029 PAPLNO95428 1278 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 OATP04181 439 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 CYP21A2P08686 494 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 NOVA1P51513 510 aaKnown RBP10.97□□□□□ -0.65
SMPD4-208ENST00000439029 CCR3P51677 355 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 LIMK1P53667 647 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 PRKCEQ02156 737 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 GAS6Q14393 721 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 PPP2R5DQ14738 602 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 MTERF2Q49AM1 385 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 PPM1LQ5SGD2 360 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 WWC2Q6AWC2 1192 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 TANGO2Q6ICL3 276 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 POTEHQ6S545 545 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 TICAM2Q86XR7 235 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 RHPN2Q8IUC4 686 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 ZCCHC14Q8WYQ9 949 aaKnown RBP10.97□□□□□ -0.65
SMPD4-208ENST00000439029 FAM167AQ96KS9 214 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 NLRP4Q96MN2 994 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 GAD1Q99259 594 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 LZTS2Q9BRK4 669 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 TMEM121BQ9BXQ6 578 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-208ENST00000439029 NRBP2Q9NSY0 501 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 C2orf42Q9NWW7 574 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 MIOSQ9NXC5 875 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 CACNG4Q9UBN1 327 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 PCDHA10Q9Y5I2 948 aa10.97□□□□□ -0.65
SMPD4-208ENST00000439029 NOTCH4Q99466 2003 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 E7EWF7 191 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 DDAH1O94760 285 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 EFEMP2O95967 443 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 C8AP07357 584 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 SMARCA1P28370 1054 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 NAPAP54920 295 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 UBXN11Q5T124 520 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 LIN9Q5TKA1 542 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 JAKMIP3Q5VZ66 844 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 ZNF746Q6NUN9 644 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-208ENST00000439029 FUT10Q6P4F1 479 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 NFXL1Q6ZNB6 911 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 NCOA7Q8NI08 942 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 RSPH1Q8WYR4 309 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 APOL6Q9BWW8 343 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 LSM14BQ9BX40 385 aaKnown RBP10.96□□□□□ -0.65
SMPD4-208ENST00000439029 ADAM33Q9BZ11 813 aa10.96□□□□□ -0.65
SMPD4-208ENST00000439029 RNF39Q9H2S5 420 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms