RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 PIGOQ8TEQ8 1089 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 UIMC1Q96RL1 719 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 PTPN18Q99952 460 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 SRRTQ9BXP5 876 aaKnown RBP8.42□□□□□ -1.06
HMGB2-202ENST00000438704 TMX1Q9H3N1 280 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 ZNF408Q9H9D4 720 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 PDLIM7Q9NR12 457 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 SPTLC3Q9NUV7 552 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 SCHIP1Q9P0W5 487 aaPredicted RBP8.42□□□□□ -1.06
HMGB2-202ENST00000438704 CGNQ9P2M7 1197 aaKnown RBP8.42□□□□□ -1.06
HMGB2-202ENST00000438704 NRBP1Q9UHY1 535 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 KCNG1Q9UIX4 513 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 MAFBQ9Y5Q3 323 aaPredicted RBP8.42□□□□□ -1.06
HMGB2-202ENST00000438704 SYNGAP1Q96PV0 1343 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 WDR81Q562E7 1941 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 SRCAPQ6ZRS2 3230 aa8.42□□□□□ -1.06
HMGB2-202ENST00000438704 ZNFX1Q9P2E3 1918 aaKnown RBP8.41□□□□□ -1.06
HMGB2-202ENST00000438704 NPHP3-ACAD11A0A0J9YXS1 232 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 ZNF862O60290 1169 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 LGR5O75473 907 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 FAM13AO94988 1023 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 CYP2C8P10632 490 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 UBA1P22314 1058 aaKnown RBP8.41□□□□□ -1.06
HMGB2-202ENST00000438704 MAPK4P31152 587 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 HOXD13P35453 343 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 DNM2P50570 870 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 HUNKP57058 714 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 SP2Q02086 613 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 GRB14Q14449 540 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 UGCGQ16739 394 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 XKR3Q5GH77 459 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 FIGNQ5HY92 759 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 ANO5Q75V66 913 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 ZNF720Q7Z2F6 126 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 TMC6Q7Z403 805 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 SAPCD2Q86UD0 394 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 SLC9A9Q8IVB4 645 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 C12orf56Q8IXR9 622 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 RETREG2Q8NC44 543 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 GOLGA5Q8TBA6 731 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 SMCR8Q8TEV9 937 aaPredicted RBP8.41□□□□□ -1.06
HMGB2-202ENST00000438704 CACTINQ8WUQ7 758 aaKnown RBP8.41□□□□□ -1.06
HMGB2-202ENST00000438704 HPS3Q969F9 1004 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 HVCN1Q96D96 273 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 CCDC51Q96ER9 411 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 DRC1Q96MC2 740 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 ERGIC2Q96RQ1 377 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 NTPCRQ9BSD7 190 aaKnown RBP8.41□□□□□ -1.06
HMGB2-202ENST00000438704 PORCNQ9H237 461 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 VTA1Q9NP79 307 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 TYW1Q9NV66 732 aaKnown RBP8.41□□□□□ -1.06
HMGB2-202ENST00000438704 LARSQ9P2J5 1176 aaKnown RBP8.41□□□□□ -1.06
HMGB2-202ENST00000438704 MAGEC2Q9UBF1 373 aaPredicted RBP8.41□□□□□ -1.06
HMGB2-202ENST00000438704 DDX41Q9UJV9 622 aaKnown RBP8.41□□□□□ -1.06
HMGB2-202ENST00000438704 MAPK8IP1Q9UQF2 711 aa8.41□□□□□ -1.06
HMGB2-202ENST00000438704 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.41□□□□□ -1.061e-25■■■■■ 32.6
HMGB2-202ENST00000438704 EMSYQ7Z589 1322 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 ELOA3CA0A087WX78 387 aaPredicted RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 SLC15A5A6NIM6 579 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 ELOA3DA6NLF2 546 aaPredicted RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 RSPH10B2B2RC85 870 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 DDX39AO00148 427 aaKnown RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 N4BP3O15049 544 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 ZBTB39O15060 712 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 SLC16A3O15427 465 aaKnown RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 TEX33O43247 280 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 CALUO43852 315 aaPredicted RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 PEX10O60683 326 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 HIP1RO75146 1068 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 TPM2P07951 284 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 HOXC6P09630 235 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 RSPH10BP0C881 870 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 PLS3P13797 630 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 SFPQP23246 707 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 MSNP26038 577 aaKnown RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 RPL13P26373 211 aaKnown RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 SLC26A2P50443 739 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 CASP5P51878 434 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 PCBP4P57723 403 aaKnown RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 CCZ1BP86790 482 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 CCZ1P86791 482 aaPredicted RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 PPP2R3AQ06190 1150 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 FSTL1Q12841 308 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 TEAD4Q15561 434 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 TARBP2Q15633 366 aaKnown RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 MAN2A1Q16706 1144 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 ELOA3BQ3SY89 546 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 MIIPQ5JXC2 388 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 CELF3Q5SZQ8 465 aaKnown RBP8.4□□□□□ -1.06
HMGB2-202ENST00000438704 RGMBQ6NW40 437 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 ARMCX5Q6P1M9 558 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 FRMD5Q7Z6J6 570 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 GLIS3Q8NEA6 775 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 MCPH1Q8NEM0 835 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 ELOA3Q8NG57 546 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 SCFD2Q8WU76 684 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 SEPT1Q8WYJ6 367 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 KIFAP3Q92845 792 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 TRIM11Q96F44 468 aa8.4□□□□□ -1.06
HMGB2-202ENST00000438704 FAM167AQ96KS9 214 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms