RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 APOL6Q9BWW8 343 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 TMEM60Q9H2L4 133 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 TTC12Q9H892 705 aaPredicted RBP20.23■□□□□ 0.83
GTF3A-204ENST00000438571 DZANK1Q9NVP4 752 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 NR2E1Q9Y466 385 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 USP34Q70CQ2 3546 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 INO80B-WBP1J3KQ70 363 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 C2CD2LO14523 706 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 ASAP2O43150 1006 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 B4GALT5O43286 388 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 LILRB3O75022 631 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 ITGA4P13612 1032 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 GLRA2P23416 452 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 TXKP42681 527 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 RARRES1P49788 294 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 SCNN1GP51170 649 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 CLCN4P51793 760 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 BMS1Q14692 1282 aaKnown RBP20.22■□□□□ 0.83
GTF3A-204ENST00000438571 ANKRD1Q15327 319 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 EXOC8Q8IYI6 725 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 COLGALT2Q8IYK4 626 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 TMEM87AQ8NBN3 555 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 PIGOQ8TEQ8 1089 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 RIPOR3Q96MK2 946 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 FAM193BQ96PV7 902 aaPredicted RBP20.22■□□□□ 0.83
GTF3A-204ENST00000438571 TMEM175Q9BSA9 504 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 NXF3Q9H4D5 531 aaKnown RBP20.22■□□□□ 0.83
GTF3A-204ENST00000438571 FAM86C1Q9NVL1 165 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 PCDHA12Q9UN75 941 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 FAN1Q9Y2M0 1017 aa20.22■□□□□ 0.83
GTF3A-204ENST00000438571 MYH11P35749 1972 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 NEMFO60524 1076 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 LYPLA2O95372 231 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 MYBP10242 640 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 ARF4P18085 180 aaPredicted RBP20.21■□□□□ 0.83
GTF3A-204ENST00000438571 ARL2P36404 184 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 GUCY1B3Q02153 619 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 GIT2Q14161 759 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 CABP7Q86V35 215 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 IFNLR1Q8IU57 520 aaPredicted RBP20.21■□□□□ 0.83
GTF3A-204ENST00000438571 MTMR9Q96QG7 549 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 HERC2P3Q9BVR0 1158 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 BRMS1Q9HCU9 246 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 GPRC5CQ9NQ84 441 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 DBR1Q9UK59 544 aaKnown RBP20.21■□□□□ 0.83
GTF3A-204ENST00000438571 SORCS3Q9UPU3 1222 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 CACNA1HO95180 2353 aa20.21■□□□□ 0.83
GTF3A-204ENST00000438571 MYH15Q9Y2K3 1946 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 ARL5CA6NH57 179 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 USO1O60763 962 aaKnown RBP20.2■□□□□ 0.82
GTF3A-204ENST00000438571 SEC24BO95487 1268 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 OR1G1P47890 313 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 DSC1Q08554 894 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 NOTUMQ6P988 496 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 RNF168Q8IYW5 571 aaPredicted RBP20.2■□□□□ 0.82
GTF3A-204ENST00000438571 TDRD5Q8NAT2 981 aaKnown RBP20.2■□□□□ 0.82
GTF3A-204ENST00000438571 CSRNP2Q9H175 543 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 POLR3FQ9H1D9 316 aaPredicted RBP20.2■□□□□ 0.82
GTF3A-204ENST00000438571 SFXN1Q9H9B4 322 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 CACNG4Q9UBN1 327 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 MYO15AQ9UKN7 3530 aa20.2■□□□□ 0.82
GTF3A-204ENST00000438571 INPPL1O15357 1258 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 DGAT1O75907 488 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 EFEMP2O95967 443 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 SOD2P04179 222 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 ALDH2P05091 517 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 NEFLP07196 543 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 ATP2B1P20020 1258 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 AKAP5P24588 427 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 KLRC2P26717 231 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 AVPR2P30518 371 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 MTMR3Q13615 1198 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 MXD4Q14582 209 aaPredicted RBP20.19■□□□□ 0.82
GTF3A-204ENST00000438571 ATAT1Q5SQI0 421 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 MAEAQ7L5Y9 396 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 GSTCDQ8NEC7 633 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 RABGGTAQ92696 567 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 B3GALT6Q96L58 329 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 ANKEF1Q9NU02 776 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 KANSL3Q9P2N6 904 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 LIMD1Q9UGP4 676 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 CITO14578 2027 aa20.19■□□□□ 0.82
GTF3A-204ENST00000438571 CARNS1A5YM72 827 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 NPTXRO95502 500 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 SPATA31C1P0DKV0 1188 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 AXLP30530 894 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 NEK4P51957 841 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 PTPN5P54829 565 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 TFDP1Q14186 410 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 GPR149Q86SP6 731 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 CNNM3Q8NE01 707 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 EMILIN2Q9BXX0 1053 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 MAN1C1Q9NR34 630 aa20.18■□□□□ 0.82
GTF3A-204ENST00000438571 MRPL17Q9NRX2 175 aaKnown RBP20.18■□□□□ 0.82
GTF3A-204ENST00000438571 PDCD11Q14690 1871 aaKnown RBP20.18■□□□□ 0.82
GTF3A-204ENST00000438571 SPDYE4A6NLX3 237 aa20.17■□□□□ 0.82
GTF3A-204ENST00000438571 TTLL13PA6NNM8 815 aa20.17■□□□□ 0.82
GTF3A-204ENST00000438571 TEX28O15482 410 aa20.17■□□□□ 0.82
GTF3A-204ENST00000438571 MED24O75448 989 aa20.17■□□□□ 0.82
GTF3A-204ENST00000438571 URODP06132 367 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms