RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 CYP4F3Q08477 520 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 RALGDSQ12967 914 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 NFE2Q16621 373 aaPredicted RBP6.94□□□□□ -1.3
MCF2-205ENST00000437564 STX1AQ16623 288 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 SHEQ5VZ18 495 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 BORAQ6PGQ7 559 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 RANBP10Q6VN20 620 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 B3GNT6Q6ZMB0 384 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 IDO2Q6ZQW0 420 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 CCDC129Q6ZRS4 1044 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 TRIM67Q6ZTA4 783 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 CYP4V2Q6ZWL3 525 aaPredicted RBP6.94□□□□□ -1.3
MCF2-205ENST00000437564 TRPM8Q7Z2W7 1104 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 ELMOD1Q8N336 334 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 NKAIN3Q8N8D7 197 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 OR10Z1Q8NGY1 313 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 CCDC12Q8WUD4 166 aaPredicted RBP6.94□□□□□ -1.3
MCF2-205ENST00000437564 GAB3Q8WWW8 586 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 ZNF274Q96GC6 653 aaPredicted RBP6.94□□□□□ -1.3
MCF2-205ENST00000437564 RPRD1AQ96P16 312 aaPredicted RBP6.94□□□□□ -1.3
MCF2-205ENST00000437564 RAB3IPQ96QF0 476 aaPredicted RBP6.94□□□□□ -1.3
MCF2-205ENST00000437564 CDRT15Q96T59 188 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 ESF1Q9H501 851 aaKnown RBP6.94□□□□□ -1.3
MCF2-205ENST00000437564 STARD7Q9NQZ5 370 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 STK17AQ9UEE5 414 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 LEMD3Q9Y2U8 911 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 IFT52Q9Y366 437 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 EPN1Q9Y6I3 576 aaPredicted RBP6.94□□□□□ -1.3
MCF2-205ENST00000437564 MROH7Q68CQ1 1323 aa6.94□□□□□ -1.3
MCF2-205ENST00000437564 CYP2D7A0A087X1C5 515 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 XPO1O14980 1071 aaKnown RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 STX10O60499 249 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 RANBP6O60518 1105 aaKnown RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 HSF2BPO75031 334 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 UPP2O95045 317 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 HMGN1P05114 100 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 USP17L8P0C7I0 530 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 RHOXF2BP0C7M4 288 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 ZNF12P17014 697 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 NDUFV2P19404 249 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 ALAS2P22557 587 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 TXKP42681 527 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 STAT2P52630 851 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 USP14P54578 494 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 VBP1P61758 197 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 NOP14P78316 857 aaKnown RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 PPP2R2BQ00005 443 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 PPP2R5CQ13362 524 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 MVPQ14764 893 aaKnown RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 METTL24Q5JXM2 366 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 CLVS2Q5SYC1 327 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 PLBD1Q6P4A8 553 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 KLHL35Q6PF15 583 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 TPTE2Q6XPS3 522 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 DTHD1Q6ZMT9 781 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 IKBIPQ70UQ0 350 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 FAM124AQ86V42 546 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 LONP2Q86WA8 852 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 GATAD2AQ86YP4 633 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 MMAAQ8IVH4 418 aaKnown RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 SLC38A6Q8IZM9 456 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 ST13P4Q8IZP2 240 aaPredicted RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 ENDOVQ8N8Q3 282 aaKnown RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 TTLQ8NG68 377 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 TTLL11Q8NHH1 800 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 PYROXD1Q8WU10 500 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 HSPH1Q92598 858 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 DGCR14Q96DF8 476 aaKnown RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 CHAMP1Q96JM3 812 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 WDR24Q96S15 920 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 NELL2Q99435 816 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 RHOXF2Q9BQY4 288 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 KCTD10Q9H3F6 313 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 RAD21L1Q9H4I0 556 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 RUBCNLQ9H714 662 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 ACAD9Q9H845 621 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 RNPEPL1Q9HAU8 725 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 PALMDQ9NP74 551 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 KCNQ5Q9NR82 932 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 SH2B1Q9NRF2 756 aaPredicted RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 CUEDC1Q9NWM3 386 aaPredicted RBP6.93□□□□□ -1.3
MCF2-205ENST00000437564 ADAM22Q9P0K1 906 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 SLC7A8Q9UHI5 535 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 RABGEF1Q9UJ41 708 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 EDARQ9UNE0 448 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 PLAAQ9Y263 795 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 SPEF1Q9Y4P9 236 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 KDM5DQ9BY66 1539 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 CLTCL1P53675 1640 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 KPNA5O15131 536 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 ST8SIA5O15466 376 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 TRAPPC3O43617 180 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 ADAM23O75077 832 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 PRLP01236 227 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 COL6A2P12110 1019 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 PTGS2P35354 604 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 GJA5P36382 358 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 HSPA13P48723 471 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 CDK7P50613 346 aa6.93□□□□□ -1.3
MCF2-205ENST00000437564 GALK1P51570 392 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms