RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GLB1LQ6UWU2 654 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 RNF135Q8IUD6 432 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 ADA2Q9NZK5 511 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 TSR3Q9UJK0 312 aaKnown RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 ROR1Q01973 937 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 IFT88Q13099 833 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 USP28Q96RU2 1077 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 RAVER2Q9HCJ3 691 aaKnown RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 NMRK1Q9NWW6 199 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 PCDHA6Q9UN73 950 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 PCDHA8Q9Y5H6 950 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 ERN1O75460 977 aaKnown RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 NDUFS3O75489 264 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 TMED1Q13445 227 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 SNAPC2Q13487 334 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 LRRC24Q50LG9 513 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 TMEM60Q9H2L4 133 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 H2AFYO75367 372 aaKnown RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 TPI1P60174 286 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 FBXO18Q8NFZ0 1043 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 CLIC6Q96NY7 704 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 FAM217BQ9NTX9 383 aaPredicted RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 PJA2O43164 708 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 ADORA2BP29275 332 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 CEP55Q53EZ4 464 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 DEPDC1Q5TB30 811 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 ERAP2Q6P179 960 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 RNF180Q86T96 592 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 MYRIPQ8NFW9 859 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 MRGBPQ9NV56 204 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 UTP6Q9NYH9 597 aaKnown RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 PIN4Q9Y237 131 aaKnown RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 SLFN14P0C7P3 912 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 NDUFA8P51970 172 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 SNX30Q5VWJ9 437 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 CNOT8Q9UFF9 292 aaKnown RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 SNTNA6NMZ2 147 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 ZMYND10O75800 440 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 EXD1Q8NHP7 514 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 MRPL48Q96GC5 212 aaKnown RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 CEP95Q96GE4 821 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 FOXP3Q9BZS1 431 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 TMEM245Q9H330 911 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 GEMIN8Q9NWZ8 242 aaKnown RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 CDC23Q9UJX2 597 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 MLNP12872 115 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 CASP14P31944 242 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 HARS2P49590 506 aaKnown RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 DYNLL1P63167 89 aaKnown RBP11.84□□□□□ -0.51
SCN4A-201ENST00000435607 UBE2SQ16763 222 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 ZNF827Q17R98 1081 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 AP1ARQ63HQ0 302 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 KCTD16Q68DU8 428 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 FAM20AQ96MK3 541 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 BHMT2Q9H2M3 363 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 PLEKHA5Q9HAU0 1116 aa11.84□□□□□ -0.51
SCN4A-201ENST00000435607 GYG2O15488 501 aa11.83□□□□□ -0.51
SCN4A-201ENST00000435607 CTIFO43310 598 aaKnown RBP11.83□□□□□ -0.51
SCN4A-201ENST00000435607 ECE2O60344 883 aa11.83□□□□□ -0.51
SCN4A-201ENST00000435607 TOMM70O94826 608 aa11.83□□□□□ -0.51
SCN4A-201ENST00000435607 BCAR1P56945 870 aa11.83□□□□□ -0.51
SCN4A-201ENST00000435607 ARL6IP4Q66PJ3 421 aaKnown RBP11.83□□□□□ -0.51
SCN4A-201ENST00000435607 VPS37AQ8NEZ2 397 aa11.83□□□□□ -0.51
SCN4A-201ENST00000435607 RASGRP4Q8TDF6 673 aa11.83□□□□□ -0.51
SCN4A-201ENST00000435607 NHEJ1Q9H9Q4 299 aaPredicted RBP11.83□□□□□ -0.51
SCN4A-201ENST00000435607 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.83□□□□□ -0.51
SCN4A-201ENST00000435607 PKP3Q9Y446 797 aa11.83□□□□□ -0.51
SCN4A-201ENST00000435607 A0A1W2PQ27 194 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 A0A1W2PQ64 194 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 A0A1W2PQD8 194 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 CCDC188H7C350 402 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 PLCG1P19174 1290 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 CLEC4GQ6UXB4 293 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
SCN4A-201ENST00000435607 GNA15P30679 374 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 QARSP47897 775 aaKnown RBP11.83□□□□□ -0.52
SCN4A-201ENST00000435607 GPC5P78333 572 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 IL31Q6EBC2 164 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 PPP1R18Q6NYC8 613 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 MED15Q96RN5 788 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 FAM213AQ9BRX8 229 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 PLEKHG2Q9H7P9 1386 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 ACADMP11310 421 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 ADRA2BP18089 450 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 DCP1BQ8IZD4 617 aaKnown RBP11.83□□□□□ -0.52
SCN4A-201ENST00000435607 ZNF555Q8NEP9 628 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 SCUBE2Q9NQ36 999 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 LATS2Q9NRM7 1088 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 A0A0D9SFI3 127 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 ADD2P35612 726 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 ETF1P62495 437 aaKnown RBP11.83□□□□□ -0.52
SCN4A-201ENST00000435607 ZBED6P86452 979 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 STILQ15468 1287 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 OSCP1Q8WVF1 389 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 DHX35Q9H5Z1 703 aaKnown RBP11.83□□□□□ -0.52
SCN4A-201ENST00000435607 PCDHA7Q9UN72 937 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 APOL1O14791 398 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 ZBTB5O15062 677 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms