RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SPG21Q9NZD8 308 aa17.92■□□□□ 0.46
SMPD4-207ENST00000435455 CCDC39Q9UFE4 941 aa17.92■□□□□ 0.46
SMPD4-207ENST00000435455 ODF2LQ9ULJ1 636 aa17.92■□□□□ 0.46
SMPD4-207ENST00000435455 LZTS1Q9Y250 596 aa17.92■□□□□ 0.46
SMPD4-207ENST00000435455 CUL9Q8IWT3 2517 aa17.92■□□□□ 0.46
SMPD4-207ENST00000435455 ZMYM2Q9UBW7 1377 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 SPTLC2O15270 562 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 YEATS4O95619 227 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 ALDH7A1P49419 539 aaKnown RBP17.91■□□□□ 0.46
SMPD4-207ENST00000435455 SMTNP53814 917 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 MRPS5P82675 430 aaKnown RBP17.91■□□□□ 0.46
SMPD4-207ENST00000435455 PLCB3Q01970 1234 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 RAD51AP2Q09MP3 1159 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 AAK1Q2M2I8 961 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 TCEAL5Q5H9L2 206 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 SPECC1Q5M775 1068 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 ATL3Q6DD88 541 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 APBB1IPQ7Z5R6 666 aaPredicted RBP17.91■□□□□ 0.46
SMPD4-207ENST00000435455 LINC00301Q8NCQ3 95 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 SPIRE2Q8WWL2 714 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 LARP4BQ92615 738 aaKnown RBP17.91■□□□□ 0.46
SMPD4-207ENST00000435455 HLA-CQ95604 372 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 CLIC6Q96NY7 704 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 NTPCRQ9BSD7 190 aaKnown RBP17.91■□□□□ 0.46
SMPD4-207ENST00000435455 NXF3Q9H4D5 531 aaKnown RBP17.91■□□□□ 0.46
SMPD4-207ENST00000435455 PDZD7Q9H5P4 517 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 ARHGAP28Q9P2N2 729 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 TFIP11Q9UBB9 837 aaKnown RBP17.91■□□□□ 0.46
SMPD4-207ENST00000435455 STK17AQ9UEE5 414 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 PUF60Q9UHX1 559 aaKnown RBP17.91■□□□□ 0.46
SMPD4-207ENST00000435455 GIT1Q9Y2X7 761 aa17.91■□□□□ 0.46
SMPD4-207ENST00000435455 TDRD15B5MCY1 1934 aaKnown RBP17.9■□□□□ 0.46
SMPD4-207ENST00000435455 INPPL1O15357 1258 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 NCK2O43639 380 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 ZC3H11AO75152 810 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMPD4-207ENST00000435455 PLS3P13797 630 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 DNAJB1P25685 340 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 BCAR1P56945 870 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 KRT17Q04695 432 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 CAMK1Q14012 370 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 BECN1Q14457 450 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 DHX8Q14562 1220 aaKnown RBP17.9■□□□□ 0.46
SMPD4-207ENST00000435455 MCM6Q14566 821 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 ARSHQ5FYA8 562 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 PDE12Q6L8Q7 609 aaKnown RBP17.9■□□□□ 0.46
SMPD4-207ENST00000435455 USP49Q70CQ1 688 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 CDR2LQ86X02 465 aaPredicted RBP17.9■□□□□ 0.46
SMPD4-207ENST00000435455 APOL6Q9BWW8 343 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 LARSQ9P2J5 1176 aaKnown RBP17.9■□□□□ 0.46
SMPD4-207ENST00000435455 HES2Q9Y543 173 aa17.9■□□□□ 0.46
SMPD4-207ENST00000435455 ARL5CA6NH57 179 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 TTLL13PA6NNM8 815 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 SFI1A8K8P3 1242 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 H0YCG3 227 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 PPP6R2O75170 966 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 KRT18P05783 430 aaKnown RBP17.89■□□□□ 0.45
SMPD4-207ENST00000435455 DDIT3P35638 169 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 PBX3P40426 434 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 DCAF4L1Q3SXM0 396 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 ATF7IP2Q5U623 682 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 RRAGBQ5VZM2 374 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 SLC39A11Q8N1S5 342 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 LRRC15Q8TF66 581 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 MRPS27Q92552 414 aaKnown RBP17.89■□□□□ 0.45
SMPD4-207ENST00000435455 FAM193BQ96PV7 902 aaPredicted RBP17.89■□□□□ 0.45
SMPD4-207ENST00000435455 GBP3Q9H0R5 595 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 NRDE2Q9H7Z3 1164 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 TLR9Q9NR96 1032 aa17.89■□□□□ 0.45
SMPD4-207ENST00000435455 NPHP3-ACAD11A0A0J9YXS1 232 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 SLC16A4O15374 487 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 FAM13AO94988 1023 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 SCP2P22307 547 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 MLH1P40692 756 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 NT5DC1Q5TFE4 455 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 CCDC73Q6ZRK6 1079 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 TMEM169Q96HH4 297 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 ASB2Q96Q27 587 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 GAD1Q99259 594 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 REEP2Q9BRK0 252 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 MRPL4Q9BYD3 311 aaKnown RBP17.88■□□□□ 0.45
SMPD4-207ENST00000435455 UBE2ZQ9H832 354 aaPredicted RBP17.88■□□□□ 0.45
SMPD4-207ENST00000435455 TNFSF13BQ9Y275 285 aa17.88■□□□□ 0.45
SMPD4-207ENST00000435455 TTC28Q96AY4 2481 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 CUTAO60888 179 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 CSPG5O95196 566 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 EDN1P05305 212 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 GALTP07902 379 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 AFF1P51825 1210 aaKnown RBP17.87■□□□□ 0.45
SMPD4-207ENST00000435455 STRN3Q13033 797 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 PKP1Q13835 747 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 FOXD4L6Q3SYB3 417 aaPredicted RBP17.87■□□□□ 0.45
SMPD4-207ENST00000435455 TJAP1Q5JTD0 557 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 EEF1DP3Q658K8 133 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 FOXD4L3Q6VB84 417 aaPredicted RBP17.87■□□□□ 0.45
SMPD4-207ENST00000435455 ZNF280BQ86YH2 543 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 TMEM161BQ8NDZ6 487 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 KCNG4Q8TDN1 519 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 MICAL1Q8TDZ2 1067 aa17.87■□□□□ 0.45
SMPD4-207ENST00000435455 PABPC5Q96DU9 382 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms