RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 GIT2Q14161 759 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 PUM3Q15397 648 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 BTNL9Q6UXG8 535 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 IZUMO2Q6UXV1 221 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 ZDHHC14Q8IZN3 488 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 ENDOVQ8N8Q3 282 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 RPGRQ92834 1020 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 PRDM11Q9NQV5 511 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 TMEM260Q9NX78 707 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 CNOT7Q9UIV1 285 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 AFDNP55196 1824 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 NID2Q14112 1375 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 A0A0G2JND7 137 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 TXNDC9O14530 226 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 SH3BGRP55822 239 aaPredicted RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 COASYQ13057 564 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 MPP3Q13368 585 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 ARHGAP44Q17R89 818 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 TRIM59Q8IWR1 403 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 TBCKQ8TEA7 893 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 MPP4Q96JB8 637 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 PHF12Q96QT6 1004 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 MKNK1Q9BUB5 465 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 CADM1Q9BY67 442 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 TAS2R14Q9NYV8 317 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 NAALADL1Q9UQQ1 740 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 RGPD8O14715 1765 aaPredicted RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 USP1O94782 785 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 STK10O94804 968 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 RFC1P35251 1148 aaPredicted RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 SLC34A1Q06495 639 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 MAGEB18Q96M61 343 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 PNMA5Q96PV4 448 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 FAM118BQ9BPY3 351 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 TIPINQ9BVW5 301 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 PCDHB13Q9Y5F0 798 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 WTIPA6NIX2 430 aaPredicted RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 DDX3YO15523 660 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 ATP5HO75947 161 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 ZWINTO95229 277 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 LIN52Q52LA3 116 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 PTF1AQ7RTS3 328 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 CROCCP2Q86T23 111 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 CCDC125Q86Z20 511 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 APLFQ8IW19 511 aaPredicted RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 ORAI2Q96SN7 254 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 PDP2Q9P2J9 529 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 NIP7Q9Y221 180 aaKnown RBP eCLIP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 RIC1Q4ADV7 1423 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 PIAS1O75925 651 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 DDAH1O94760 285 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 TRMT1LQ7Z2T5 733 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 GATA6Q92908 595 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 DCAF5Q96JK2 942 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 THAP2Q9H0W7 228 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 TSPYL2Q9H2G4 693 aaPredicted RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 DHX36Q9H2U1 1008 aaKnown RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 SLC4A7Q9Y6M7 1214 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 SIGLEC16A6NMB1 481 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 MAGEB3O15480 346 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 KRT15P19012 456 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 PTGIRP43119 386 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 DHX34Q14147 1143 aaKnown RBP7.96□□□□□ -1.13
CPSF6-202ENST00000435070 WDR72Q3MJ13 1102 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 MDH1BQ5I0G3 518 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 ZNF746Q6NUN9 644 aaPredicted RBP7.96□□□□□ -1.13
CPSF6-202ENST00000435070 NLRP9Q7RTR0 991 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 SLC25A41Q8N5S1 370 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 AGBL1Q96MI9 1066 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 RUNDC3BQ96NL0 473 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 ALG6Q9Y672 507 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 RGPD2P0DJD1 1756 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 LRRN2O75325 713 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 PSMG1O95456 288 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 PTPN4P29074 926 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 NONOQ15233 471 aaKnown RBP eCLIP7.96□□□□□ -1.132e-6■■■□□ 18.6
CPSF6-202ENST00000435070 ZCWPW2Q504Y3 356 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 PALB2Q86YC2 1186 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 PNMA1Q8ND90 353 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 MIPOL1Q8TD10 442 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 FAM163AQ96GL9 167 aaPredicted RBP7.96□□□□□ -1.13
CPSF6-202ENST00000435070 ZNF184Q99676 751 aaPredicted RBP7.96□□□□□ -1.13
CPSF6-202ENST00000435070 ISCA1Q9BUE6 129 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 RIC8AQ9NPQ8 531 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 PASKQ96RG2 1323 aa7.96□□□□□ -1.13
CPSF6-202ENST00000435070 SMCO2A6NFE2 343 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 CLIC2O15247 247 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 PHF2O75151 1096 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 PGM3O95394 542 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 KRT79Q5XKE5 535 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 SDCCAG8Q86SQ7 713 aaPredicted RBP7.96□□□□□ -1.14
CPSF6-202ENST00000435070 CEP70Q8NHQ1 597 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 CFAP61Q8NHU2 1237 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 FAM161BQ96MY7 647 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 ASCC2Q9H1I8 757 aaPredicted RBP7.96□□□□□ -1.14
CPSF6-202ENST00000435070 C12orf65Q9H3J6 166 aaKnown RBP7.96□□□□□ -1.14
CPSF6-202ENST00000435070 COMMD10Q9Y6G5 202 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 EXOC3O60645 756 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 DCTN3O75935 186 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 STAMBPO95630 424 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms