RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TMEM8AQ9HCN3 771 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 AMACRQ9UHK6 382 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 COQ4Q9Y3A0 265 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 PCDHA10Q9Y5I2 948 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 CCDC169A6NNP5 214 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 TTI1O43156 1089 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 DAPK3O43293 454 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 KRT14P02533 472 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 SCP2P22307 547 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 CHRNA3P32297 505 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 CTNNA1P35221 906 aaKnown RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 GPC3P51654 580 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 OAZ1P54368 228 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 DRG2P55039 364 aaKnown RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 EIF3BP55884 814 aaKnown RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 RTP1P59025 263 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 DR1Q01658 176 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 PRPF4BQ13523 1007 aaKnown RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 SNRNP35Q16560 246 aaKnown RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 UGCGQ16739 394 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 PTPROQ16827 1216 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 SEL1L2Q5TEA6 688 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 DCAF15Q66K64 600 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 FOXR1Q6PIV2 292 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 B4GALNT4Q76KP1 1039 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 ENOSF1Q7L5Y1 443 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 TMEM161BQ8NDZ6 487 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 BCAS4Q8TDM0 211 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 SLC20A1Q8WUM9 679 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 JDP2Q8WYK2 163 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 SHC3Q92529 594 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 ATP6V0A1Q93050 837 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 CDHR1Q96JP9 859 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 TEPSINQ96N21 525 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 NT5C1BQ96P26 610 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 NTPCRQ9BSD7 190 aaKnown RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 RPAP3Q9H6T3 665 aaPredicted RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 KMT5AQ9NQR1 393 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 HOMER2Q9NSB8 354 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 TAS2R14Q9NYV8 317 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 PARP2Q9UGN5 583 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 COG5Q9UP83 839 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 ALG6Q9Y672 507 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 GRIN2DO15399 1336 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 PHF2O75151 1096 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 ZC3H11AO75152 810 aaKnown RBP eCLIP11.23□□□□□ -0.61
CD44-210ENST00000434472 STAM2O75886 525 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 SGPL1O95470 568 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 PSAPP07602 524 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 VCAM1P19320 739 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 GARTP22102 1010 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 CTNNA2P26232 953 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 USP8P40818 1118 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 CDR1P51861 262 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 CORO7P57737 925 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
CD44-210ENST00000434472 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
CD44-210ENST00000434472 SPP2Q13103 211 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 TRADDQ15628 312 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 DCAF12L1Q5VU92 463 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 DUPD1Q68J44 220 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 NSMFQ6X4W1 530 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 CROCCP2Q86T23 111 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 MCPH1Q8NEM0 835 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 PLEKHO2Q8TD55 490 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 EPS8L1Q8TE68 723 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 PARD3BQ8TEW8 1205 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 UBLCP1Q8WVY7 318 aaPredicted RBP11.23□□□□□ -0.61
CD44-210ENST00000434472 MFSD14AQ96MC6 490 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 ZSWIM1Q9BR11 485 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 ERP44Q9BS26 406 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 FAM129AQ9BZQ8 928 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 KIAA1586Q9HCI6 787 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 RNF146Q9NTX7 359 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 UVRAGQ9P2Y5 699 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 FEZ2Q9UHY8 353 aaPredicted RBP11.23□□□□□ -0.61
CD44-210ENST00000434472 NOCTQ9UK39 431 aaKnown RBP11.23□□□□□ -0.61
CD44-210ENST00000434472 GTF3C4Q9UKN8 822 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 MTUS1Q9ULD2 1270 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 NFASCO94856 1347 aa11.23□□□□□ -0.61
CD44-210ENST00000434472 TESPA1A2RU30 521 aaPredicted RBP11.22□□□□□ -0.61
CD44-210ENST00000434472 DENND3A2RUS2 1198 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 TISP43B9A030 160 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 H0YGN5 161 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 VWA5AO00534 786 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 PODXLO00592 558 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 KIAA0391O15091 583 aaKnown RBP11.22□□□□□ -0.61
CD44-210ENST00000434472 CCNE2O96020 404 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 CYP1A2P05177 515 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 ADRB2P07550 413 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 CHRNB2P17787 502 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 CNGA1P29973 690 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 MDH1P40925 334 aaKnown RBP11.22□□□□□ -0.61
CD44-210ENST00000434472 MAGEA9P43362 315 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 NPTX2P47972 431 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 PDE6CP51160 858 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 KCTD16Q68DU8 428 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 MICALCLQ6ZW33 695 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms