RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LRRC8CQ8TDW0 803 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 SPIRE2Q8WWL2 714 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 DHX36Q9H2U1 1008 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 DOCK2Q92608 1830 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L15C9J2P7 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L13C9JLJ4 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L11C9JVI0 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L18D6R9N7 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L22D6RA61 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L17D6RBQ6 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L19D6RCP7 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L20D6RJB6 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 MAPK13O15264 365 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 LDHBP07195 334 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 TAC1P20366 129 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 CCNG1P51959 295 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L24Q0WX57 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 RNF43Q68DV7 783 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 USP17L6PQ6QN14 398 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 NSMFQ6X4W1 530 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 RNF207Q6ZRF8 634 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 KIAA0825Q8IV33 1275 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 FAM186BQ8IYM0 893 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 SLC30A5Q8TAD4 765 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 ATG4AQ8WYN0 398 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 MAGEB18Q96M61 343 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 FAM118BQ9BPY3 351 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 TMEM109Q9BVC6 243 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 DENND2DQ9H6A0 471 aaPredicted RBP12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 PHTF1Q9UMS5 762 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 NAALADL1Q9UQQ1 740 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 CHKBQ9Y259 395 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 ANKRD62A6NC57 917 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 NVLO15381 856 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 CLDN3O15551 220 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 NTSR2O95665 410 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 TTLL1O95922 423 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 PYGLP06737 847 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 HOXD13P35453 343 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 POLGP54098 1239 aaPredicted RBP12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 TRMT10CQ7L0Y3 403 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 FBXO33Q7Z6M2 555 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 METTL14Q9HCE5 456 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 PCYOX1Q9UHG3 505 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 SCOCQ9UIL1 159 aa12.37□□□□□ -0.43
HMGCS1-202ENST00000433297 CETPP11597 493 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 ADCY8P40145 1251 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 GIT2Q14161 759 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 RPUSD2Q8IZ73 545 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 GALNT15Q8N3T1 639 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 FGD4Q96M96 766 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 ZSWIM1Q9BR11 485 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 BSDC1Q9NW68 430 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 WDR91A4D1P6 747 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 POC1B-GALNT4F8VUJ3 575 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 FOXN3O00409 490 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 TBCAO75347 108 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 KHDC1Q4VXA5 237 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 PARP10Q53GL7 1025 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 TNFAIP8L3Q5GJ75 292 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 FOXR2Q6PJQ5 311 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 DDX50Q9BQ39 737 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 STK33Q9BYT3 514 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 NENFQ9UMX5 172 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 DNM3Q9UQ16 869 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 BAG3O95817 575 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 CNGA1P29973 690 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 ZC2HC1CQ53FD0 456 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 TAF1BQ53T94 588 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 SGO2Q562F6 1265 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 B4GALNT2Q8NHY0 566 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 ASAP3Q8TDY4 903 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 NMRK1Q9NWW6 199 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 DCTN4Q9UJW0 460 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 TRAF3IP3Q9Y228 551 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 PLCH1Q4KWH8 1693 aa12.36□□□□□ -0.43
HMGCS1-202ENST00000433297 FAM196BA6NMK8 535 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 WFS1O76024 890 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 TTC4O95801 387 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 ITGA8P53708 1063 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 COG2Q14746 738 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 GRIK5Q16478 980 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 CBWD6Q4V339 395 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 CBWD3Q5JTY5 395 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 CBWD5Q5RIA9 395 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 TTBK2Q6IQ55 1244 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 RFWD3Q6PCD5 774 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 CATSPER3Q86XQ3 398 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 SLC13A5Q86YT5 568 aaPredicted RBP12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 C4orf33Q8N1A6 199 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 RBBP8NLQ8NC74 664 aaPredicted RBP12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 PHC3Q8NDX5 983 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 LRMDAQ9H2I8 198 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
HMGCS1-202ENST00000433297 USH1CQ9Y6N9 552 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms