RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 TOMM70O94826 608 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 EGFRP00533 1210 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 RETP07949 1114 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 SDSP20132 328 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 ARHGDIBP52566 201 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 TAGLNQ01995 201 aaKnown RBP11.63□□□□□ -0.55
CCDC171-202ENST00000432954 GOLGA8FQ08AF8 430 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 GOLGA8DPQ0D2H9 430 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 CUL1Q13616 776 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 STK38Q15208 465 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 KCNJ8Q15842 424 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 HERC4Q5GLZ8 1057 aaPredicted RBP11.63□□□□□ -0.55
CCDC171-202ENST00000432954 DHRS4L2Q6PKH6 230 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 ZC3H18Q86VM9 953 aaKnown RBP11.63□□□□□ -0.55
CCDC171-202ENST00000432954 RNF169Q8NCN4 708 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 OR10Z1Q8NGY1 313 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 NOC3LQ8WTT2 800 aaKnown RBP11.63□□□□□ -0.55
CCDC171-202ENST00000432954 NLRP7Q8WX94 980 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 RUFY2Q8WXA3 655 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 IMPG2Q9BZV3 1241 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 CDH19Q9H159 772 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 PPP1R14DQ9NXH3 145 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 PASKQ96RG2 1323 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 HNRNPCL2B2RXH8 293 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 TK2O00142 265 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 HNRNPCL1O60812 293 aaKnown RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 UFL1O94874 794 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 STAT2P52630 851 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 NCAPHQ15003 741 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 LEXMQ3ZCV2 418 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 ZNF658Q5TYW1 1059 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 TTBK2Q6IQ55 1244 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 RUFY3Q7L099 469 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 ENAHQ8N8S7 591 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 TC2NQ8N9U0 490 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 NMD3Q96D46 503 aaKnown RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 ZNF274Q96GC6 653 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 TSEN34Q9BSV6 310 aaKnown RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 TMEM206Q9H813 350 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 DCLRE1BQ9H816 532 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 UVRAGQ9P2Y5 699 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 ANGPTL3Q9Y5C1 460 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 NOS1P29475 1434 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 KIAA0556O60303 1618 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 KIAA0232Q92628 1395 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 RSPH10B2B2RC85 870 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 SNPHO15079 494 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 TLR2O60603 784 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 UBOX5O94941 541 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 RSPH10BP0C881 870 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 MTHFD1P11586 935 aaKnown RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 CCNB1P14635 433 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 CPA1P15085 419 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 CDH3P22223 829 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 PPARGP37231 505 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 ECE1P42892 770 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 P2RX3P56373 397 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 UBXN1Q04323 297 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 KDSRQ06136 332 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 PLEKHG6Q3KR16 790 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 CCDC58Q4VC31 144 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 SPDYAQ5MJ70 313 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 SLFN13Q68D06 897 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 IDO2Q6ZQW0 420 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 CEP68Q76N32 757 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 MMGT1Q8N4V1 131 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 NKX2-3Q8TAU0 364 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 PBKQ96KB5 322 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 NUDCD1Q96RS6 583 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 NUP85Q9BW27 656 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 TMBIM4Q9HC24 238 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 FANCLQ9NW38 375 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 GGA3Q9NZ52 723 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 ANAPC5Q9UJX4 755 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 ZBTB21Q9ULJ3 1066 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 LIMCH1Q9UPQ0 1083 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 STK38LQ9Y2H1 464 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 PCDHGA3Q9Y5H0 932 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 PPP2R3BQ9Y5P8 575 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 CASKIN1Q8WXD9 1431 aa11.62□□□□□ -0.55
CCDC171-202ENST00000432954 CDK13Q14004 1512 aaKnown RBP11.62□□□□□ -0.55
CCDC171-202ENST00000432954 FAM237AA0A1B0GTK4 181 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 C17orf113A0A1B0GUU1 675 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 GCOM1H8Y6P7 765 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-202ENST00000432954 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
CCDC171-202ENST00000432954 TFRCP02786 760 aaKnown RBP11.61□□□□□ -0.55
CCDC171-202ENST00000432954 GSTM1P09488 218 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 ALOX5P09917 674 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 RCVRNP35243 200 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 CLK3P49761 638 aaKnown RBP11.61□□□□□ -0.55
CCDC171-202ENST00000432954 DSC3Q14574 896 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 C6orf132Q5T0Z8 1188 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 HAUS3Q68CZ6 603 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 LRIG3Q6UXM1 1119 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 ATG9AQ7Z3C6 839 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 HEATR4Q86WZ0 1026 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 TMEM57Q8N5G2 664 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms